fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052604 not found in 188aa AT2G36450.1 not_1st 0.509433962 II
Gm040940 not found in 188aa AT2G36450.1 not_1st 0.509433962 II
Pt043438 not found in 214aa AT2G36450.1 not_1st 0.455974842 II
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G36450.1     ----------------MQGTSKDN-------------------GGRHPLYRGVRQRKNSN
gm040940_Glyma1 -------------MRSSNGASSSRASNAN--------------TGRHPVYRGVR-RRSSG
pt043438_POPTR_ MQDSQPTKTSSPNISSSSGSSGSRTASASASAAVIAGAVAPRVSGSQRAFRGVR-RRSSG
gm052604_Glyma1 -------------MRSSNGTSSSRASNGN--------------TGRHPVYRGVR-RRSSG
                                 .*:* ..                    * :  :**** *:.*.

AT2G36450.1     KWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSLPAPTSMS
gm040940_Glyma1 KWVSEIREPKKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPNSASSLPVPASSA
pt043438_POPTR_ KWVSEIREPKKPNRIWLGTFPNPEMAAVAYDVAALALKGQNADLNFPNSAASLPVPASTS
gm052604_Glyma1 KWVSEIREPKKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPNSASSLPIPASSA
                *********:**********..*****:***********.:*:******.:*** *:* :

AT2G36450.1     PADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSSYDNTNMNGFMDEDLVFDMPN
gm040940_Glyma1 ARDIQMAAASAAAAVGAANDALEGSRGGNAS---VSLTEEFSGGNLNHFVDEDLIFDMPN
pt043438_POPTR_ PRDIQAAAASAAAAIGAAKDALGIPNMGDTN----QMEQEITPTVDDQFVDEDLIFDMPN
gm052604_Glyma1 AHDIQMAAALAATAVGAANDALEGSQGGNVS---VSLAEEFSGGNLNHFVDEDLIFDMPN
                . *** *** **:*.***.**:  .. .. .     : ..      : *:****:*****

AT2G36450.1     VLMNMAEGMLLSPPRPTVFD-------AAYDADGFPGGDDYLWNFP--
gm040940_Glyma1 ILVNMAEGMLLSPPR---FD---NFAATDYEYMD---EDPNLWGFPNY
pt043438_POPTR_ VLVNMAEGMLLSPPR---LDIAGDETTTAYDNTG----DQNLWKFP--
gm052604_Glyma1 ILVNMAEGMLLSPPR---FD---NFAATDYEYMD---EDPNLWGFPNY
                :*:************   :*       : *:  .    *  ** **
BoxShade v3.31 C (beta, 970507) Output
AT2G36450.1     - - - - - - - - - - - - - - - - M Q G T S K D N - - - - - - - - - - - - - - - - - - - G G R H P L Y R G V R Q R K N S N
gm040940_Glyma1    - - - - - - - - - - - - - M R S S N G A S S S R A S N A N - - - - - - - - - - - - - - T G R H P V Y R G V R - R R S S G
pt043438_POPTR_    M Q D S Q P T K T S S P N I S S S S G S S G S R T A S A S A S A A V I A G A V A P R V S G S Q R A F R G V R - R R S S G
gm052604_Glyma1    - - - - - - - - - - - - - M R S S N G T S S S R A S N G N - - - - - - - - - - - - - - T G R H P V Y R G V R - R R S S G
 
AT2G36450.1     K W V S E I R E P R K P N R I W L G T F S T P E M A A I A Y D V A A L A L K G S Q A E L N F P N S V S S L P A P T S M S
gm040940_Glyma1    K W V S E I R E P K K P N R I W L G T F A T P E M A A I A Y D V A A L A L K G K D A E L N F P N S A S S L P V P A S S A
pt043438_POPTR_    K W V S E I R E P K K P N R I W L G T F P N P E M A A V A Y D V A A L A L K G Q N A D L N F P N S A A S L P V P A S T S
gm052604_Glyma1    K W V S E I R E P K K P N R I W L G T F A T P E M A A I A Y D V A A L A L K G K D A E L N F P N S A S S L P I P A S S A
 
AT2G36450.1     P A D I Q A A A A S A A A A F G A A R D A I V M A N N N S Q T S G V A C M N S S Y D N T N M N G F M D E D L V F D M P N
gm040940_Glyma1    A R D I Q M A A A S A A A A V G A A N D A L E G S R G G N A S - - - V S L T E E F S G G N L N H F V D E D L I F D M P N
pt043438_POPTR_    P R D I Q A A A A S A A A A I G A A K D A L G I P N M G D T N - - - - Q M E Q E I T P T V D D Q F V D E D L I F D M P N
gm052604_Glyma1    A H D I Q M A A A L A A T A V G A A N D A L E G S Q G G N V S - - - V S L A E E F S G G N L N H F V D E D L I F D M P N
 
AT2G36450.1     V L M N M A E G M L L S P P R P T V F D - - - - - - - A A Y D A D G F P G G D D Y L W N F P - -
gm040940_Glyma1    I L V N M A E G M L L S P P R - - - F D - - - N F A A T D Y E Y M D - - - E D P N L W G F P N Y
pt043438_POPTR_    V L V N M A E G M L L S P P R - - - L D I A G D E T T T A Y D N T G - - - - D Q N L W K F P - -
gm052604_Glyma1    I L V N M A E G M L L S P P R - - - F D - - - N F A A T D Y E Y M D - - - E D P N L W G F P N Y
 
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