fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007540 not found in 188aa AT2G36450.1 1st_1st 0.515723270 Ia
Pt005950 not found in 208aa AT2G36450.1 1st_1st 0.462264150 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G36450.1     ----------------MQGTSKDN--------------GGRHPLYRGVRQRKNSNKWVSE
gm007540_Glyma0 -----------MRSSNGASSSRASNAN-----------TGRHPVYRGVR-RRSSGKWVSE
pt005950_POPTR_ MQYYQQSNTSSADSSSSSGSSRTASAAAAAAGAIAPKVSGHHHVFRGVR-RRSSGKWVSE
                                  .:*:                 *:* ::**** *:.*.*****

AT2G36450.1     IREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSLPAPTSMSPADIQ
gm007540_Glyma0 IREPKKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPNSASSLPVPTSSAARDIQ
pt005950_POPTR_ IREPKKPNRIWLGTFPNPEMAAVAYDVAALALKGQDAELNFPNSAASLPVPASTSPRDIQ
                ****:**********..*****:***********.:********.:***.*:* :. ***

AT2G36450.1     AAAASAAAAFGAARDAI-VMANNNSQTSGVACMNSSYDNTNMNGFMDEDLVFDMPNVLMN
gm007540_Glyma0 MAAASAAAAVGAANDALEGSRGGNASVS----LTEEFSGGNLNHFVDEDLIFDMPNILVN
pt005950_POPTR_ AAAASAAAAIGAAKDAL-GIRSMGDTNQ----MEQEIRPMVNDQFVDEDLMFDMPNVLVN
                 ********.***.**:    . .   .    : ..      : *:****:*****:*:*

AT2G36450.1     MAEGMLLSPPRPTVFD--AAYDADGFPG-GDDYLWNFP--
gm007540_Glyma0 MAEGMLLSPPR---FDNFAATDYEYMDE--DPNLWGFPNY
pt005950_POPTR_ MAEAMLLSPPR---LD-IAGDDATAYDSTGDQNLWKFP--
                ***.*******   :*  *. *        *  ** **
BoxShade v3.31 C (beta, 970507) Output
AT2G36450.1     - - - - - - - - - - - - - - - - M Q G T S K D N - - - - - - - - - - - - - - G G R H P L Y R G V R Q R K N S N K W V S E
gm007540_Glyma0    - - - - - - - - - - - M R S S N G A S S S R A S N A N - - - - - - - - - - - T G R H P V Y R G V R - R R S S G K W V S E
pt005950_POPTR_    M Q Y Y Q Q S N T S S A D S S S S S G S S R T A S A A A A A A G A I A P K V S G H H H V F R G V R - R R S S G K W V S E
 
AT2G36450.1     I R E P R K P N R I W L G T F S T P E M A A I A Y D V A A L A L K G S Q A E L N F P N S V S S L P A P T S M S P A D I Q
gm007540_Glyma0    I R E P K K P N R I W L G T F A T P E M A A I A Y D V A A L A L K G K D A E L N F P N S A S S L P V P T S S A A R D I Q
pt005950_POPTR_    I R E P K K P N R I W L G T F P N P E M A A V A Y D V A A L A L K G Q D A E L N F P N S A A S L P V P A S T S P R D I Q
 
AT2G36450.1     A A A A S A A A A F G A A R D A I - V M A N N N S Q T S G V A C M N S S Y D N T N M N G F M D E D L V F D M P N V L M N
gm007540_Glyma0    M A A A S A A A A V G A A N D A L E G S R G G N A S V S - - - - L T E E F S G G N L N H F V D E D L I F D M P N I L V N
pt005950_POPTR_    A A A A S A A A A I G A A K D A L - G I R S M G D T N Q - - - - M E Q E I R P M V N D Q F V D E D L M F D M P N V L V N
 
AT2G36450.1     M A E G M L L S P P R P T V F D - - A A Y D A D G F P G - G D D Y L W N F P - -
gm007540_Glyma0    M A E G M L L S P P R - - - F D N F A A T D Y E Y M D E - - D P N L W G F P N Y
pt005950_POPTR_    M A E A M L L S P P R - - - L D - I A G D D A T A Y D S T G D Q N L W K F P - -
 
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