fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sm013467 not found in 175aa AT2G36450.1 1st_1st 0.377358490 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36450.1     MQGTSKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAAL
Sm013467_Selmo1 PQQQQSDQETQHPLYRGIR-RRSWGKWVSEIREPKKKTRIWLGSFPTPEMAARAYDVAAI
                 *  ..*:  :******:* *:. .*********:* .*****:*.****** ******:

AT2G36450.1     ALKGSQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANNNSQTSGVA
Sm013467_Selmo1 SLKGPKAVLNFPEFAYSLPQPAMVSPKSIQQAAAAAALAFSSCS-----LGTSSSSNTKA
                :***.:* ****: . *** *: :** .** ***:** **.:.       ...*.:.  *

AT2G36450.1     CMNSSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFDAAYDADGFPGGDDYL
Sm013467_Selmo1 SYRSSLASEGQVNYVDEDMIFNMPDVVTDMAQAMLLAPPRLS--QEQSDEEDESGEEASI
                . .**  . .  .::***::*:**:*: :**:.***:*** :  :   * :. .* :  :

AT2G36450.1     WNFP
Sm013467_Selmo1 WSY-
                *.:
BoxShade v3.31 C (beta, 970507) Output
AT2G36450.1     M Q G T S K D N G G R H P L Y R G V R Q R K N S N K W V S E I R E P R K P N R I W L G T F S T P E M A A I A Y D V A A L
Sm013467_Selmo1    P Q Q Q Q S D Q E T Q H P L Y R G I R - R R S W G K W V S E I R E P K K K T R I W L G S F P T P E M A A R A Y D V A A I
 
AT2G36450.1     A L K G S Q A E L N F P N S V S S L P A P T S M S P A D I Q A A A A S A A A A F G A A R D A I V M A N N N S Q T S G V A
Sm013467_Selmo1    S L K G P K A V L N F P E F A Y S L P Q P A M V S P K S I Q Q A A A A A A L A F S S C S - - - - - L G T S S S S N T K A
 
AT2G36450.1     C M N S S Y D N T N M N G F M D E D L V F D M P N V L M N M A E G M L L S P P R P T V F D A A Y D A D G F P G G D D Y L
Sm013467_Selmo1    S Y R S S L A S E G Q V N Y V D E D M I F N M P D V V T D M A Q A M L L A P P R L S - - Q E Q S D E E D E S G E E A S I
 
AT2G36450.1     W N F P
Sm013467_Selmo1    W S Y -
 
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