fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007540 not found in 188aa AT2G36450.1 1st_1st 0.515723270 Ia
Gm052604 not found in 188aa AT2G36450.1 not_1st 0.509433962 II
Gm040940 not found in 188aa AT2G36450.1 not_1st 0.509433962 II
Pt005950 not found in 208aa AT2G36450.1 1st_1st 0.462264150 Ia
Pt043438 not found in 214aa AT2G36450.1 not_1st 0.455974842 II
Sm013467 not found in 175aa AT2G36450.1 1st_1st 0.377358490 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G36450.1     ----------------MQGTSKDN-------------------GGRHPLYRGVRQRKNSN
gm052604_Glyma1 -------------MRSSNGTSSSRASNGN--------------TGRHPVYRGVR-RRSSG
gm007540_Glyma0 -------------MRSSNGASSSRASNAN--------------TGRHPVYRGVR-RRSSG
pt005950_POPTR_ MQYYQQSNTSSADSSSSSGS--SRTASAAAAA---AGAIAPKVSGHHHVFRGVR-RRSSG
Sm013467_Selmo1 ----------------PQQQQSDQ-------------------ETQHPLYRGIR-RRSWG
gm040940_Glyma1 -------------MRSSNGASSSRASNAN--------------TGRHPVYRGVR-RRSSG
pt043438_POPTR_ MQDSQPTKTSSPNISSSSGSSGSRTASASASAAVIAGAVAPRVSGSQRAFRGVR-RRSSG
                                 .    ..                      :  :**:* *:. .

AT2G36450.1     KWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSLPAPTSMS
gm052604_Glyma1 KWVSEIREPKKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPNSASSLPIPASSA
gm007540_Glyma0 KWVSEIREPKKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPNSASSLPVPTSSA
pt005950_POPTR_ KWVSEIREPKKPNRIWLGTFPNPEMAAVAYDVAALALKGQDAELNFPNSAASLPVPASTS
Sm013467_Selmo1 KWVSEIREPKKKTRIWLGSFPTPEMAARAYDVAAISLKGPKAVLNFPEFAYSLPQPAMVS
gm040940_Glyma1 KWVSEIREPKKPNRIWLGTFATPEMAAIAYDVAALALKGKDAELNFPNSASSLPVPASSA
pt043438_POPTR_ KWVSEIREPKKPNRIWLGTFPNPEMAAVAYDVAALALKGQNADLNFPNSAASLPVPASTS
                *********:* .*****:*..***** ******::*** .* ****: . *** *:  :

AT2G36450.1     PADIQAAAASAAAAFGAARDAIVMANNNSQTSGVACMNSSYDNTNMNGFMDEDLVFDMPN
gm052604_Glyma1 AHDIQMAAALAATAVGAANDALEGSQGGNVS---VSLAEEFSGGNLNHFVDEDLIFDMPN
gm007540_Glyma0 ARDIQMAAASAAAAVGAANDALEGSRGGNAS---VSLTEEFSGGNLNHFVDEDLIFDMPN
pt005950_POPTR_ PRDIQAAAASAAAAIGAAKDALGIRSMGDTN----QMEQEIRPMVNDQFVDEDLMFDMPN
Sm013467_Selmo1 PKSIQQAAAAAALAFSSC--SLGTSSSSNTK---ASYRSSLASEGQVNYVDEDMIFNMPD
gm040940_Glyma1 ARDIQMAAASAAAAVGAANDALEGSRGGNAS---VSLTEEFSGGNLNHFVDEDLIFDMPN
pt043438_POPTR_ PRDIQAAAASAAAAIGAAKDALGIPNMGDTN----QMEQEITPTVDDQFVDEDLIFDMPN
                . .** *** ** *..:.  ::     .. .       ..        ::***::*:**:

AT2G36450.1     VLMNMAEGMLLSPPRPTVF----DAAYDADGFPGGDDYLWNFP--
gm052604_Glyma1 ILVNMAEGMLLSPPRFDNFA---ATDYEYMD---EDPNLWGFPNY
gm007540_Glyma0 ILVNMAEGMLLSPPRFDNFA---ATDYEYMD---EDPNLWGFPNY
pt005950_POPTR_ VLVNMAEAMLLSPPRLDIAGDD-ATAYDSTG----DQNLWKFP--
Sm013467_Selmo1 VVTDMAQAMLLAPPRLSQEQ---SDEEDESG---EEASIWSY---
gm040940_Glyma1 ILVNMAEGMLLSPPRFDNFA---ATDYEYMD---EDPNLWGFPNY
pt043438_POPTR_ VLVNMAEGMLLSPPRLDIAGDETTTAYDNTG----DQNLWKFP--
                :: :**:.***:***            :  .    :  :* :
BoxShade v3.31 C (beta, 970507) Output
AT2G36450.1     - - - - - - - - - - - - - - - - M Q G T S K D N - - - - - - - - - - - - - - - - - - - G G R H P L Y R G V R Q R K N S N
gm052604_Glyma1    - - - - - - - - - - - - - M R S S N G T S S S R A S N G N - - - - - - - - - - - - - - T G R H P V Y R G V R - R R S S G
gm007540_Glyma0    - - - - - - - - - - - - - M R S S N G A S S S R A S N A N - - - - - - - - - - - - - - T G R H P V Y R G V R - R R S S G
pt005950_POPTR_    M Q Y Y Q Q S N T S S A D S S S S S G S - - S R T A S A A A A A - - - A G A I A P K V S G H H H V F R G V R - R R S S G
Sm013467_Selmo1    - - - - - - - - - - - - - - - - P Q Q Q Q S D Q - - - - - - - - - - - - - - - - - - - E T Q H P L Y R G I R - R R S W G
gm040940_Glyma1    - - - - - - - - - - - - - M R S S N G A S S S R A S N A N - - - - - - - - - - - - - - T G R H P V Y R G V R - R R S S G
pt043438_POPTR_    M Q D S Q P T K T S S P N I S S S S G S S G S R T A S A S A S A A V I A G A V A P R V S G S Q R A F R G V R - R R S S G
 
AT2G36450.1     K W V S E I R E P R K P N R I W L G T F S T P E M A A I A Y D V A A L A L K G S Q A E L N F P N S V S S L P A P T S M S
gm052604_Glyma1    K W V S E I R E P K K P N R I W L G T F A T P E M A A I A Y D V A A L A L K G K D A E L N F P N S A S S L P I P A S S A
gm007540_Glyma0    K W V S E I R E P K K P N R I W L G T F A T P E M A A I A Y D V A A L A L K G K D A E L N F P N S A S S L P V P T S S A
pt005950_POPTR_    K W V S E I R E P K K P N R I W L G T F P N P E M A A V A Y D V A A L A L K G Q D A E L N F P N S A A S L P V P A S T S
Sm013467_Selmo1    K W V S E I R E P K K K T R I W L G S F P T P E M A A R A Y D V A A I S L K G P K A V L N F P E F A Y S L P Q P A M V S
gm040940_Glyma1    K W V S E I R E P K K P N R I W L G T F A T P E M A A I A Y D V A A L A L K G K D A E L N F P N S A S S L P V P A S S A
pt043438_POPTR_    K W V S E I R E P K K P N R I W L G T F P N P E M A A V A Y D V A A L A L K G Q N A D L N F P N S A A S L P V P A S T S
 
AT2G36450.1     P A D I Q A A A A S A A A A F G A A R D A I V M A N N N S Q T S G V A C M N S S Y D N T N M N G F M D E D L V F D M P N
gm052604_Glyma1    A H D I Q M A A A L A A T A V G A A N D A L E G S Q G G N V S - - - V S L A E E F S G G N L N H F V D E D L I F D M P N
gm007540_Glyma0    A R D I Q M A A A S A A A A V G A A N D A L E G S R G G N A S - - - V S L T E E F S G G N L N H F V D E D L I F D M P N
pt005950_POPTR_    P R D I Q A A A A S A A A A I G A A K D A L G I R S M G D T N - - - - Q M E Q E I R P M V N D Q F V D E D L M F D M P N
Sm013467_Selmo1    P K S I Q Q A A A A A A L A F S S C - - S L G T S S S S N T K - - - A S Y R S S L A S E G Q V N Y V D E D M I F N M P D
gm040940_Glyma1    A R D I Q M A A A S A A A A V G A A N D A L E G S R G G N A S - - - V S L T E E F S G G N L N H F V D E D L I F D M P N
pt043438_POPTR_    P R D I Q A A A A S A A A A I G A A K D A L G I P N M G D T N - - - - Q M E Q E I T P T V D D Q F V D E D L I F D M P N
 
AT2G36450.1     V L M N M A E G M L L S P P R P T V F - - - - D A A Y D A D G F P G G D D Y L W N F P - -
gm052604_Glyma1    I L V N M A E G M L L S P P R F D N F A - - - A T D Y E Y M D - - - E D P N L W G F P N Y
gm007540_Glyma0    I L V N M A E G M L L S P P R F D N F A - - - A T D Y E Y M D - - - E D P N L W G F P N Y
pt005950_POPTR_    V L V N M A E A M L L S P P R L D I A G D D - A T A Y D S T G - - - - D Q N L W K F P - -
Sm013467_Selmo1    V V T D M A Q A M L L A P P R L S Q E Q - - - S D E E D E S G - - - E E A S I W S Y - - -
gm040940_Glyma1    I L V N M A E G M L L S P P R F D N F A - - - A T D Y E Y M D - - - E D P N L W G F P N Y
pt043438_POPTR_    V L V N M A E G M L L S P P R L D I A G D E T T T A Y D N T G - - - - D Q N L W K F P - -
 
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