fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005950 not found in 208aa AT2G36450.1 1st_1st 0.462264150 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36450.1     MQGTSKDN------------------------------GGRHPLYRGVRQRKNSNKWVSE
pt005950_POPTR_ MQYYQQSNTSSADSSSSSGSSRTASAAAAAAGAIAPKVSGHHHVFRGVR-RRSSGKWVSE
                **  .:.*                              .*:* ::**** *:.*.*****

AT2G36450.1     IREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSLPAPTSMSPADIQ
pt005950_POPTR_ IREPKKPNRIWLGTFPNPEMAAVAYDVAALALKGQDAELNFPNSAASLPVPASTSPRDIQ
                ****:**********..*****:***********.:********.:***.*:* ** ***

AT2G36450.1     AAAASAAAAFGAARDAI---VMANNNSQTSGVACMNSSYDNTNMNGFMDEDLVFDMPNVL
pt005950_POPTR_ AAAASAAAAIGAAKDALGIRSMGDTNQMEQEIRPMVN-------DQFVDEDLMFDMPNVL
                *********:***:**:    *.:.*.  . :  * .       : *:****:*******

AT2G36450.1     MNMAEGMLLSPPRPTVF--DA-AYDADGFPGGDDYLWNFP
pt005950_POPTR_ VNMAEAMLLSPPRLDIAGDDATAYDST----GDQNLWKFP
                :****.*******  :   ** ***:     **: **:**
BoxShade v3.31 C (beta, 970507) Output
AT2G36450.1     M Q G T S K D N - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - G G R H P L Y R G V R Q R K N S N K W V S E
pt005950_POPTR_    M Q Y Y Q Q S N T S S A D S S S S S G S S R T A S A A A A A A G A I A P K V S G H H H V F R G V R - R R S S G K W V S E
 
AT2G36450.1     I R E P R K P N R I W L G T F S T P E M A A I A Y D V A A L A L K G S Q A E L N F P N S V S S L P A P T S M S P A D I Q
pt005950_POPTR_    I R E P K K P N R I W L G T F P N P E M A A V A Y D V A A L A L K G Q D A E L N F P N S A A S L P V P A S T S P R D I Q
 
AT2G36450.1     A A A A S A A A A F G A A R D A I - - - V M A N N N S Q T S G V A C M N S S Y D N T N M N G F M D E D L V F D M P N V L
pt005950_POPTR_    A A A A S A A A A I G A A K D A L G I R S M G D T N Q M E Q E I R P M V N - - - - - - - D Q F V D E D L M F D M P N V L
 
AT2G36450.1     M N M A E G M L L S P P R P T V F - - D A - A Y D A D G F P G G D D Y L W N F P
pt005950_POPTR_    V N M A E A M L L S P P R L D I A G D D A T A Y D S T - - - - G D Q N L W K F P
 
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