Input
| Putative repression domain
|
|
AT2G36450.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt005950 |
not found in 208aa |
AT2G36450.1 |
1st_1st |
0.462264150 |
Ia |
Pt043438 |
not found in 214aa |
AT2G36450.1 |
not_1st |
0.455974842 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT2G36450.1 MQ----------GTSKDNG-------------------------GRHPLYRGVRQRKNSN
pt043438_POPTR_ MQDSQPTKTSSPNISSSSGSSGSRTASASASAAVIAGAVAPRVSGSQRAFRGVR-RRSSG
pt005950_POPTR_ MQYYQQSNTSSADSSSSSGS--SRTASAAAAA---AGAIAPKVSGHHHVFRGVR-RRSSG
** . *...* * : :**** *:.*.
AT2G36450.1 KWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGSQAELNFPNSVSSLPAPTSMS
pt043438_POPTR_ KWVSEIREPKKPNRIWLGTFPNPEMAAVAYDVAALALKGQNADLNFPNSAASLPVPASTS
pt005950_POPTR_ KWVSEIREPKKPNRIWLGTFPNPEMAAVAYDVAALALKGQDAELNFPNSAASLPVPASTS
*********:**********..*****:***********.:*:******.:***.*:* *
AT2G36450.1 PADIQAAAASAAAAFGAARDAI---VMANNNSQTSGVACMNSSYDNTNMNGFMDEDLVFD
pt043438_POPTR_ PRDIQAAAASAAAAIGAAKDALGIPNMGDTNQ-------MEQEITPTVDDQFVDEDLIFD
pt005950_POPTR_ PRDIQAAAASAAAAIGAAKDALGIRSMGDTNQ-------MEQEIRPMVNDQFVDEDLMFD
* ************:***:**: *.:.*. *:.. : *:****:**
AT2G36450.1 MPNVLMNMAEGMLLSPPRPTVF----DAAYDADGFPGGDDYLWNFP
pt043438_POPTR_ MPNVLVNMAEGMLLSPPRLDIAGDETTTAYDNT----GDQNLWKFP
pt005950_POPTR_ MPNVLVNMAEAMLLSPPRLDIAGDD-ATAYDST----GDQNLWKFP
*****:****.******* : :*** **: **:**
BoxShade v3.31 C (beta, 970507) Output
AT2G36450.1 |
M |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
G |
T |
S |
K |
D |
N |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
G |
R |
H |
P |
L |
Y |
R |
G |
V |
R |
Q |
R |
K |
N |
S |
N |
pt043438_POPTR_ |
M |
Q |
D |
S |
Q |
P |
T |
K |
T |
S |
S |
P |
N |
I |
S |
S |
S |
S |
G |
S |
S |
G |
S |
R |
T |
A |
S |
A |
S |
A |
S |
A |
A |
V |
I |
A |
G |
A |
V |
A |
P |
R |
V |
S |
G |
S |
Q |
R |
A |
F |
R |
G |
V |
R |
- |
R |
R |
S |
S |
G |
pt005950_POPTR_ |
M |
Q |
Y |
Y |
Q |
Q |
S |
N |
T |
S |
S |
A |
D |
S |
S |
S |
S |
S |
G |
S |
- |
- |
S |
R |
T |
A |
S |
A |
A |
A |
A |
A |
- |
- |
- |
A |
G |
A |
I |
A |
P |
K |
V |
S |
G |
H |
H |
H |
V |
F |
R |
G |
V |
R |
- |
R |
R |
S |
S |
G |
|
AT2G36450.1 |
K |
W |
V |
S |
E |
I |
R |
E |
P |
R |
K |
P |
N |
R |
I |
W |
L |
G |
T |
F |
S |
T |
P |
E |
M |
A |
A |
I |
A |
Y |
D |
V |
A |
A |
L |
A |
L |
K |
G |
S |
Q |
A |
E |
L |
N |
F |
P |
N |
S |
V |
S |
S |
L |
P |
A |
P |
T |
S |
M |
S |
pt043438_POPTR_ |
K |
W |
V |
S |
E |
I |
R |
E |
P |
K |
K |
P |
N |
R |
I |
W |
L |
G |
T |
F |
P |
N |
P |
E |
M |
A |
A |
V |
A |
Y |
D |
V |
A |
A |
L |
A |
L |
K |
G |
Q |
N |
A |
D |
L |
N |
F |
P |
N |
S |
A |
A |
S |
L |
P |
V |
P |
A |
S |
T |
S |
pt005950_POPTR_ |
K |
W |
V |
S |
E |
I |
R |
E |
P |
K |
K |
P |
N |
R |
I |
W |
L |
G |
T |
F |
P |
N |
P |
E |
M |
A |
A |
V |
A |
Y |
D |
V |
A |
A |
L |
A |
L |
K |
G |
Q |
D |
A |
E |
L |
N |
F |
P |
N |
S |
A |
A |
S |
L |
P |
V |
P |
A |
S |
T |
S |
|
AT2G36450.1 |
P |
A |
D |
I |
Q |
A |
A |
A |
A |
S |
A |
A |
A |
A |
F |
G |
A |
A |
R |
D |
A |
I |
- |
- |
- |
V |
M |
A |
N |
N |
N |
S |
Q |
T |
S |
G |
V |
A |
C |
M |
N |
S |
S |
Y |
D |
N |
T |
N |
M |
N |
G |
F |
M |
D |
E |
D |
L |
V |
F |
D |
pt043438_POPTR_ |
P |
R |
D |
I |
Q |
A |
A |
A |
A |
S |
A |
A |
A |
A |
I |
G |
A |
A |
K |
D |
A |
L |
G |
I |
P |
N |
M |
G |
D |
T |
N |
Q |
- |
- |
- |
- |
- |
- |
- |
M |
E |
Q |
E |
I |
T |
P |
T |
V |
D |
D |
Q |
F |
V |
D |
E |
D |
L |
I |
F |
D |
pt005950_POPTR_ |
P |
R |
D |
I |
Q |
A |
A |
A |
A |
S |
A |
A |
A |
A |
I |
G |
A |
A |
K |
D |
A |
L |
G |
I |
R |
S |
M |
G |
D |
T |
N |
Q |
- |
- |
- |
- |
- |
- |
- |
M |
E |
Q |
E |
I |
R |
P |
M |
V |
N |
D |
Q |
F |
V |
D |
E |
D |
L |
M |
F |
D |
|
AT2G36450.1 |
M |
P |
N |
V |
L |
M |
N |
M |
A |
E |
G |
M |
L |
L |
S |
P |
P |
R |
P |
T |
V |
F |
- |
- |
- |
- |
D |
A |
A |
Y |
D |
A |
D |
G |
F |
P |
G |
G |
D |
D |
Y |
L |
W |
N |
F |
P |
pt043438_POPTR_ |
M |
P |
N |
V |
L |
V |
N |
M |
A |
E |
G |
M |
L |
L |
S |
P |
P |
R |
L |
D |
I |
A |
G |
D |
E |
T |
T |
T |
A |
Y |
D |
N |
T |
- |
- |
- |
- |
G |
D |
Q |
N |
L |
W |
K |
F |
P |
pt005950_POPTR_ |
M |
P |
N |
V |
L |
V |
N |
M |
A |
E |
A |
M |
L |
L |
S |
P |
P |
R |
L |
D |
I |
A |
G |
D |
D |
- |
A |
T |
A |
Y |
D |
S |
T |
- |
- |
- |
- |
G |
D |
Q |
N |
L |
W |
K |
F |
P |
|
|