fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007540 not found in 188aa AT2G36450.1 1st_1st 0.515723270 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36450.1     MQGT--------SKDNGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAA
gm007540_Glyma0 MRSSNGASSSRASNANTGRHPVYRGVR-RRSSGKWVSEIREPKKPNRIWLGTFATPEMAA
                *:.:        *: * ****:***** *:.*.*********:**********:******

AT2G36450.1     IAYDVAALALKGSQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMA-N
gm007540_Glyma0 IAYDVAALALKGKDAELNFPNSASSLPVPTSSAARDIQMAAASAAAAVGAANDALEGSRG
                ************.:********.****.*** :. *** ********.***.**:  : .

AT2G36450.1     NNSQTSGVACMNSSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFD--AAYD
gm007540_Glyma0 GNASVS----LTEEFSGGNLNHFVDEDLIFDMPNILVNMAEGMLLSPPR---FDNFAATD
                .*:..*    :...:.. *:* *:****:*****:*:************   **  ** *

AT2G36450.1     ADGFPGGDDYLWNFP--
gm007540_Glyma0 YE-YMDEDPNLWGFPNY
                 : : . *  **.**
BoxShade v3.31 C (beta, 970507) Output
AT2G36450.1     M Q G T - - - - - - - - S K D N G G R H P L Y R G V R Q R K N S N K W V S E I R E P R K P N R I W L G T F S T P E M A A
gm007540_Glyma0    M R S S N G A S S S R A S N A N T G R H P V Y R G V R - R R S S G K W V S E I R E P K K P N R I W L G T F A T P E M A A
 
AT2G36450.1     I A Y D V A A L A L K G S Q A E L N F P N S V S S L P A P T S M S P A D I Q A A A A S A A A A F G A A R D A I V M A - N
gm007540_Glyma0    I A Y D V A A L A L K G K D A E L N F P N S A S S L P V P T S S A A R D I Q M A A A S A A A A V G A A N D A L E G S R G
 
AT2G36450.1     N N S Q T S G V A C M N S S Y D N T N M N G F M D E D L V F D M P N V L M N M A E G M L L S P P R P T V F D - - A A Y D
gm007540_Glyma0    G N A S V S - - - - L T E E F S G G N L N H F V D E D L I F D M P N I L V N M A E G M L L S P P R - - - F D N F A A T D
 
AT2G36450.1     A D G F P G G D D Y L W N F P - -
gm007540_Glyma0    Y E - Y M D E D P N L W G F P N Y
 
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