fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36450.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007540 not found in 188aa AT2G36450.1 1st_1st 0.515723270 Ia
Gm052604 not found in 188aa AT2G36450.1 not_1st 0.509433962 II
Gm040940 not found in 188aa AT2G36450.1 not_1st 0.509433962 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G36450.1     ---MQGTSKD-----NGGRHPLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAA
gm052604_Glyma1 MRSSNGTSSSRASNGNTGRHPVYRGVR-RRSSGKWVSEIREPKKPNRIWLGTFATPEMAA
gm007540_Glyma0 MRSSNGASSSRASNANTGRHPVYRGVR-RRSSGKWVSEIREPKKPNRIWLGTFATPEMAA
gm040940_Glyma1 MRSSNGASSSRASNANTGRHPVYRGVR-RRSSGKWVSEIREPKKPNRIWLGTFATPEMAA
                    :*:*..     * ****:***** *:.*.*********:**********:******

AT2G36450.1     IAYDVAALALKGSQAELNFPNSVSSLPAPTSMSPADIQAAAASAAAAFGAARDAIVMANN
gm052604_Glyma1 IAYDVAALALKGKDAELNFPNSASSLPIPASSAAHDIQMAAALAATAVGAANDAL----E
gm007540_Glyma0 IAYDVAALALKGKDAELNFPNSASSLPVPTSSAARDIQMAAASAAAAVGAANDAL----E
gm040940_Glyma1 IAYDVAALALKGKDAELNFPNSASSLPVPASSAARDIQMAAASAAAAVGAANDAL----E
                ************.:********.**** *:* :. *** *** **:*.***.**:    :

AT2G36450.1     NSQTSGVAC-MNSSYDNTNMNGFMDEDLVFDMPNVLMNMAEGMLLSPPRPTVFD--AAYD
gm052604_Glyma1 GSQGGNVSVSLAEEFSGGNLNHFVDEDLIFDMPNILVNMAEGMLLSPPR---FDNFAATD
gm007540_Glyma0 GSRGGNASVSLTEEFSGGNLNHFVDEDLIFDMPNILVNMAEGMLLSPPR---FDNFAATD
gm040940_Glyma1 GSRGGNASVSLTEEFSGGNLNHFVDEDLIFDMPNILVNMAEGMLLSPPR---FDNFAATD
                .*: ...:  : ..:.. *:* *:****:*****:*:************   **  ** *

AT2G36450.1     ADGFPGGDDYLWNFP--
gm052604_Glyma1 YE-YMDEDPNLWGFPNY
gm007540_Glyma0 YE-YMDEDPNLWGFPNY
gm040940_Glyma1 YE-YMDEDPNLWGFPNY
                 : : . *  **.**
BoxShade v3.31 C (beta, 970507) Output
AT2G36450.1     - - - M Q G T S K D - - - - - N G G R H P L Y R G V R Q R K N S N K W V S E I R E P R K P N R I W L G T F S T P E M A A
gm052604_Glyma1    M R S S N G T S S S R A S N G N T G R H P V Y R G V R - R R S S G K W V S E I R E P K K P N R I W L G T F A T P E M A A
gm007540_Glyma0    M R S S N G A S S S R A S N A N T G R H P V Y R G V R - R R S S G K W V S E I R E P K K P N R I W L G T F A T P E M A A
gm040940_Glyma1    M R S S N G A S S S R A S N A N T G R H P V Y R G V R - R R S S G K W V S E I R E P K K P N R I W L G T F A T P E M A A
 
AT2G36450.1     I A Y D V A A L A L K G S Q A E L N F P N S V S S L P A P T S M S P A D I Q A A A A S A A A A F G A A R D A I V M A N N
gm052604_Glyma1    I A Y D V A A L A L K G K D A E L N F P N S A S S L P I P A S S A A H D I Q M A A A L A A T A V G A A N D A L - - - - E
gm007540_Glyma0    I A Y D V A A L A L K G K D A E L N F P N S A S S L P V P T S S A A R D I Q M A A A S A A A A V G A A N D A L - - - - E
gm040940_Glyma1    I A Y D V A A L A L K G K D A E L N F P N S A S S L P V P A S S A A R D I Q M A A A S A A A A V G A A N D A L - - - - E
 
AT2G36450.1     N S Q T S G V A C - M N S S Y D N T N M N G F M D E D L V F D M P N V L M N M A E G M L L S P P R P T V F D - - A A Y D
gm052604_Glyma1    G S Q G G N V S V S L A E E F S G G N L N H F V D E D L I F D M P N I L V N M A E G M L L S P P R - - - F D N F A A T D
gm007540_Glyma0    G S R G G N A S V S L T E E F S G G N L N H F V D E D L I F D M P N I L V N M A E G M L L S P P R - - - F D N F A A T D
gm040940_Glyma1    G S R G G N A S V S L T E E F S G G N L N H F V D E D L I F D M P N I L V N M A E G M L L S P P R - - - F D N F A A T D
 
AT2G36450.1     A D G F P G G D D Y L W N F P - -
gm052604_Glyma1    Y E - Y M D E D P N L W G F P N Y
gm007540_Glyma0    Y E - Y M D E D P N L W G F P N Y
gm040940_Glyma1    Y E - Y M D E D P N L W G F P N Y
 
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