fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006453 not found in 333aa AT5G57620.1 1st_not 0.481171548 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36890.1     MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN
pt006453_POPTR_ MGRAPCCDKANMKKGPWSPEEDAKLKEYLEKQGTGGNWIALPQKAGLKRCGKSCRLRWLN
                ***********:*:************:*:*************:****:************

AT2G36890.1     YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIAT
pt006453_POPTR_ YLRPNIKHGEFSDDEDRIICSLYANIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMGV
                ******:**:*:::**.** **:*.******:***:* *******************:..

AT2G36890.1     MAP---------------------PPHHHLAIATSSSSASPSSSSHY-NMINSLL-PYNP
pt006453_POPTR_ MNPIAQRKPQQAALFSSLLQATSLPSSPSTLLSSSSSSFTCSNNSYYSNLTRSFTDPISF
                * *                     *.     :::**** : *..*:* *: .*:  * . 

AT2G36890.1     STNQLLTPHQGIMMTMMGQQQQLFYQEDMGNLVNSPNRNNLIMSHQEDNQEQSTNKGIML
pt006453_POPTR_ SSSPMST--SSFATASMLHPQETF----VGPMQNDQVKDSLIMFGGE-------------
                *:. : *  ..:  : * : *: *    :* : *.  ::.***   *             

AT2G36890.1     LSDVRSGSSTTSTVTRVKMEHRDHDDHHHHHEE-------------DERSMTSV------
pt006453_POPTR_ ASCSSSDGSCNNQMSHVKEEYEYSGGTNNNNEQMGLQNYLYNGVEDDQKLMVSSGAAAHG
                 *   *..* .. :::** *:.  .. ::::*:             *:: *.*       

AT2G36890.1     VME----------------DYGMEEIKQLISSSCTSSNNSLWFDENKTEDKFMLYY
pt006453_POPTR_ VLNGWIEKQNGLWPGDNPLDYGLEEIKQLIS---TSSCNSFLFDENKTGEKVMYY-
                *::                ***:********   *** **: ****** :*.* *
BoxShade v3.31 C (beta, 970507) Output
AT2G36890.1     M G R A P C C D K A N V K R G P W S P E E D A K L K D Y I E K Q G T G G N W I A L P H K A G L R R C G K S C R L R W L N
pt006453_POPTR_    M G R A P C C D K A N M K K G P W S P E E D A K L K E Y L E K Q G T G G N W I A L P Q K A G L K R C G K S C R L R W L N
 
AT2G36890.1     Y L R P N I R H G D F T E E E D N I I Y S L F A S I G S R W S V I A A H L Q G R T D N D I K N Y W N T K L K K K L I A T
pt006453_POPTR_    Y L R P N I K H G E F S D D E D R I I C S L Y A N I G S R W S I I A A Q L P G R T D N D I K N Y W N T K L K K K L M G V
 
AT2G36890.1     M A P - - - - - - - - - - - - - - - - - - - - - P P H H H L A I A T S S S S A S P S S S S H Y - N M I N S L L - P Y N P
pt006453_POPTR_    M N P I A Q R K P Q Q A A L F S S L L Q A T S L P S S P S T L L S S S S S S F T C S N N S Y Y S N L T R S F T D P I S F
 
AT2G36890.1     S T N Q L L T P H Q G I M M T M M G Q Q Q Q L F Y Q E D M G N L V N S P N R N N L I M S H Q E D N Q E Q S T N K G I M L
pt006453_POPTR_    S S S P M S T - - S S F A T A S M L H P Q E T F - - - - V G P M Q N D Q V K D S L I M F G G E - - - - - - - - - - - - -
 
AT2G36890.1     L S D V R S G S S T T S T V T R V K M E H R D H D D H H H H H E E - - - - - - - - - - - - - D E R S M T S V - - - - - -
pt006453_POPTR_    A S C S S S D G S C N N Q M S H V K E E Y E Y S G G T N N N N E Q M G L Q N Y L Y N G V E D D Q K L M V S S G A A A H G
 
AT2G36890.1     V M E - - - - - - - - - - - - - - - - D Y G M E E I K Q L I S S S C T S S N N S L W F D E N K T E D K F M L Y Y
pt006453_POPTR_    V L N G W I E K Q N G L W P G D N P L D Y G L E E I K Q L I S - - - T S S C N S F L F D E N K T G E K V M Y Y -
 
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