fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36890.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm035980 not found in 305aa AT2G36890.1 not_1st 0.462343096 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36890.1     MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN
gm035980_Glyma1 MGRAPCCDKANVKKGPWSPEEDEKLREYIEKNGTGGNWIALPQKAGLKRCGKSCRLRWLN
                *************:******** **::****:**********:****:************

AT2G36890.1     YLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLI--
gm035980_Glyma1 YLRPNLKHGEFSEDEDRIICTLYASIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMGM
                *****::**:*:*:**.** :*:********:**::* ******************::  

AT2G36890.1     --ATMAPPPHHHLAIATSSSSASPSSSSHYNMINSLLPYNP-------STNQLLTPHQGI
gm035980_Glyma1 NPSALKKP--HQVNLSPMLQNSTPSSSFKNNHNSYFQPHLPFTGSESISYSSLPSDNYST
                  :::  *  *:: ::.  ..::**** : *  . : *: *       * ..* : : . 

AT2G36890.1     MMTMMGQQQQLFYQEDMGNLVNSPNRNNLIMSHQEDNQEQSTNKG------IMLLSDVRS
gm035980_Glyma1 FESLQNYQVSSVFMETSCSSSSDGSCNNNQINHVKEAELGYVGDGTFGDQIIGRLSYLNS
                : :: . * . .: *   .  .. . **  :.* :: :   ...*      *  ** :.*

AT2G36890.1     GSSTTSTVTRVKMEHRDHDDHHHHHEEDERSMTSVVMEDYGMEEIKQLIS-SSCTSSNNS
gm035980_Glyma1 GVEDQDT---LKLVPSNAGRVSGVTDEETRLWGESPLE-YGLEEIKQLISNSSC----NN
                * .  .*   :*:   : .      :*: *   .  :* **:******** ***    *.

AT2G36890.1     LWFDENKTEDKFMLYY
gm035980_Glyma1 FMLDDSKTGEMVMYY-
                : :*:.** : .* *
BoxShade v3.31 C (beta, 970507) Output
AT2G36890.1     M G R A P C C D K A N V K R G P W S P E E D A K L K D Y I E K Q G T G G N W I A L P H K A G L R R C G K S C R L R W L N
gm035980_Glyma1    M G R A P C C D K A N V K K G P W S P E E D E K L R E Y I E K N G T G G N W I A L P Q K A G L K R C G K S C R L R W L N
 
AT2G36890.1     Y L R P N I R H G D F T E E E D N I I Y S L F A S I G S R W S V I A A H L Q G R T D N D I K N Y W N T K L K K K L I - -
gm035980_Glyma1    Y L R P N L K H G E F S E D E D R I I C T L Y A S I G S R W S I I A S Q L P G R T D N D I K N Y W N T K L K K K M M G M
 
AT2G36890.1     - - A T M A P P P H H H L A I A T S S S S A S P S S S S H Y N M I N S L L P Y N P - - - - - - - S T N Q L L T P H Q G I
gm035980_Glyma1    N P S A L K K P - - H Q V N L S P M L Q N S T P S S S F K N N H N S Y F Q P H L P F T G S E S I S Y S S L P S D N Y S T
 
AT2G36890.1     M M T M M G Q Q Q Q L F Y Q E D M G N L V N S P N R N N L I M S H Q E D N Q E Q S T N K G - - - - - - I M L L S D V R S
gm035980_Glyma1    F E S L Q N Y Q V S S V F M E T S C S S S S D G S C N N N Q I N H V K E A E L G Y V G D G T F G D Q I I G R L S Y L N S
 
AT2G36890.1     G S S T T S T V T R V K M E H R D H D D H H H H H E E D E R S M T S V V M E D Y G M E E I K Q L I S - S S C T S S N N S
gm035980_Glyma1    G V E D Q D T - - - L K L V P S N A G R V S G V T D E E T R L W G E S P L E - Y G L E E I K Q L I S N S S C - - - - N N
 
AT2G36890.1     L W F D E N K T E D K F M L Y Y
gm035980_Glyma1    F M L D D S K T G E M V M Y Y -
 
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