fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os032615 not found in 124aa AT2G36930.1 1st_1st 0.434782608 Ia
Sb030974 not found in 292aa AT2G36930.1 1st_1st 0.439897698 Ia
Gm035984 not found in 119aa AT2G36930.1 1st_1st 0.514066496 Ia
Pt044616 not found in 122aa AT2G36930.1 1st_1st 0.480818414 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G36930.1     -----------MGRCPTRKVKKRRLSHKTARRDKFEVKGDDLVYTEL-----RKPETE--
gm035984_Glyma1 ----------MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQL-----NKPDEE--
pt044616_POPTR_ ----------MGGKCPSRKVKKRRYSHKTARRSKFLLKGDDAVYEEL----QQKPDGEMK
Os032615_Os08t0 ----------MGGKCPHRKVKKRRLSHKTARRGKFLVKADDAVYDELVKLADAGKDAD--
Sb030974_Sorbi1 PPPPSLLFVEMGGKCPHRKVKKRRLSHKTARRGKFLLKADDAVYDELVKLADQGKDAE--
                            *:** *:***** ******* ** :*.** ** :*        : :  

AT2G36930.1     IKPLQLDEDLPGMGQFYCLHCDRYFSNVSVRDDHFKTKKHKKRVNMMMGQAPHSQLDADL
gm035984_Glyma1 RAPLPLDEDLPGMGQYYCLHCDRYFSNVAVRDEHFKTKRHKKRIKQMMG-----------
pt044616_POPTR_ EATLPLDEDLPGMGQYYCLHCDRYFANVSVRDEHFKTKRHKKRVKQMMG-----------
Os032615_Os08t0 ATQLPVDEDLPGMGQFYCLHCDRYFASESVKEEHYRSKRHKKRIKQMSG-----------
Sb030974_Sorbi1 GKELPVDEDLPGMGQFYCLHCDRYFASESVKDDHYRSKRHKKRVKVMSG-----------
                   * :*********:*********:. :*:::*:::*:****:: * *           

AT2G36930.1     AGGMGMPDNGPKLMSNLVFTELRKPETEDLPGMGQFNCLLCHRNFSNASVMDYHFKTKKH
gm035984_Glyma1 ------------------------------------------------------------
pt044616_POPTR_ ------------------------------------------------------------
Os032615_Os08t0 ------------------------------------------------------------
Sb030974_Sorbi1 ------------------------------------------------------------
                                                                            

AT2G36930.1     KKRVKKIERPAPHSQLDADLAGGMGMPDNGPKLMSA
gm035984_Glyma1 ---------PAPHTQLDADVAAGMGMPDNGPKLMSM
pt044616_POPTR_ ---------PAPHTQLDADLAAGMGAPDNGLKLMSM
Os032615_Os08t0 ---------PAPHTQLDAELAAGMGMPDNGLKLMSM
Sb030974_Sorbi1 ---------PAPHTQLDAELAAGMGKPDNGLKLMSM
                         ****:****::*.*** **** ****
BoxShade v3.31 C (beta, 970507) Output
AT2G36930.1     - - - - - - - - - - - M G R C P T R K V K K R R L S H K T A R R D K F E V K G D D L V Y T E L - - - - - R K P E T E - -
gm035984_Glyma1    - - - - - - - - - - M G G K C P H R N V K K R R Y S H K T A R R T K F E L K G D D M V Y A Q L - - - - - N K P D E E - -
pt044616_POPTR_    - - - - - - - - - - M G G K C P S R K V K K R R Y S H K T A R R S K F L L K G D D A V Y E E L - - - - Q Q K P D G E M K
Os032615_Os08t0    - - - - - - - - - - M G G K C P H R K V K K R R L S H K T A R R G K F L V K A D D A V Y D E L V K L A D A G K D A D - -
Sb030974_Sorbi1    P P P P S L L F V E M G G K C P H R K V K K R R L S H K T A R R G K F L L K A D D A V Y D E L V K L A D Q G K D A E - -
 
AT2G36930.1     I K P L Q L D E D L P G M G Q F Y C L H C D R Y F S N V S V R D D H F K T K K H K K R V N M M M G Q A P H S Q L D A D L
gm035984_Glyma1    R A P L P L D E D L P G M G Q Y Y C L H C D R Y F S N V A V R D E H F K T K R H K K R I K Q M M G - - - - - - - - - - -
pt044616_POPTR_    E A T L P L D E D L P G M G Q Y Y C L H C D R Y F A N V S V R D E H F K T K R H K K R V K Q M M G - - - - - - - - - - -
Os032615_Os08t0    A T Q L P V D E D L P G M G Q F Y C L H C D R Y F A S E S V K E E H Y R S K R H K K R I K Q M S G - - - - - - - - - - -
Sb030974_Sorbi1    G K E L P V D E D L P G M G Q F Y C L H C D R Y F A S E S V K D D H Y R S K R H K K R V K V M S G - - - - - - - - - - -
 
AT2G36930.1     A G G M G M P D N G P K L M S N L V F T E L R K P E T E D L P G M G Q F N C L L C H R N F S N A S V M D Y H F K T K K H
gm035984_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt044616_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os032615_Os08t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb030974_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G36930.1     K K R V K K I E R P A P H S Q L D A D L A G G M G M P D N G P K L M S A
gm035984_Glyma1    - - - - - - - - - P A P H T Q L D A D V A A G M G M P D N G P K L M S M
pt044616_POPTR_    - - - - - - - - - P A P H T Q L D A D L A A G M G A P D N G L K L M S M
Os032615_Os08t0    - - - - - - - - - P A P H T Q L D A E L A A G M G M P D N G L K L M S M
Sb030974_Sorbi1    - - - - - - - - - P A P H T Q L D A E L A A G M G K P D N G L K L M S M
 
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