fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp003562 not found in 226aa AT2G36930.1 1st_1st 0.345268542 Ib
Sm017809 not found in 135aa AT2G36930.1 1st_1st 0.370843989 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G36930.1     ---------MGR--------------CPT-R-------------KVKKRRLS--------
Sm017809_Selmo1 ----------GR--------------CPNHK-------------KPAKKKYS--------
pp003562_Pp1s37 MKNGRRMNVYGRFTSSGCMCEELELSAPSSKGLPPQPELPLLVWRSALRRIPWPWSILTC
                          **              .*. :             :   :: .        

AT2G36930.1     --------------------------------------------------------HKTA
Sm017809_Selmo1 --------------------------------------------------------HKSA
pp003562_Pp1s37 KAGVLLGVVGLQLWTWELGCCTKGLNFFLWKCTCDEKLQQFAAVVCAATVHFILNLHKMK
                                                                        **  

AT2G36930.1     R--RDKFEVKGDDLVYTELRKPET---EIKPLQL-DEDLPGMGQFYCLHCDRYFSNVSVR
Sm017809_Selmo1 R--RAKFLAR-DDMIYSEVKNLESSMDEGAPARARDEDLPGMGQFYCLHCDRYFSSSSIM
pp003562_Pp1s37 RFSLDILRAR-DDMIHTELRKVETP----KSKEL-DPDLPGMGQFYCLHCDRHFTNTTIR
                *     : .: **::::*::: *:      . .  * ***************:*:. :: 

AT2G36930.1     DDHFKTKKHKKRVNMMMGQAPHSQLDADLAGGMGMPDNGPKLMSNLVFTELRKPETEDLP
Sm017809_Selmo1 EEHFKTKRHKKRVKAMQGPAPHCQLDAELAAGQGKPDNGPKL------------------
pp003562_Pp1s37 DEHYKTKKHRRRVKLMEGPAPHNQIDAEVAAGMGTPDNGPKL------------------
                ::*:***:*::**: * * *** *:**::*.* * *******                  

AT2G36930.1     GMGQFNCLLCHRNFSNASVMDYHFKTKKHKKRVKKIERPAPHSQLDADLAGGMGMPDNGP
Sm017809_Selmo1 ------------------------------------------------------------
pp003562_Pp1s37 -------------------------------------------RVGEDFALDM-------
                                                                            

AT2G36930.1     KLMSA
Sm017809_Selmo1 GVVSS
pp003562_Pp1s37 -----
BoxShade v3.31 C (beta, 970507) Output
AT2G36930.1     - - - - - - - - - M G R - - - - - - - - - - - - - - C P T - R - - - - - - - - - - - - - K V K K R R L S - - - - - - - -
Sm017809_Selmo1    - - - - - - - - - - G R - - - - - - - - - - - - - - C P N H K - - - - - - - - - - - - - K P A K K K Y S - - - - - - - -
pp003562_Pp1s37    M K N G R R M N V Y G R F T S S G C M C E E L E L S A P S S K G L P P Q P E L P L L V W R S A L R R I P W P W S I L T C
 
AT2G36930.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H K T A
Sm017809_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - H K S A
pp003562_Pp1s37    K A G V L L G V V G L Q L W T W E L G C C T K G L N F F L W K C T C D E K L Q Q F A A V V C A A T V H F I L N L H K M K
 
AT2G36930.1     R - - R D K F E V K G D D L V Y T E L R K P E T - - - E I K P L Q L - D E D L P G M G Q F Y C L H C D R Y F S N V S V R
Sm017809_Selmo1    R - - R A K F L A R - D D M I Y S E V K N L E S S M D E G A P A R A R D E D L P G M G Q F Y C L H C D R Y F S S S S I M
pp003562_Pp1s37    R F S L D I L R A R - D D M I H T E L R K V E T P - - - - K S K E L - D P D L P G M G Q F Y C L H C D R H F T N T T I R
 
AT2G36930.1     D D H F K T K K H K K R V N M M M G Q A P H S Q L D A D L A G G M G M P D N G P K L M S N L V F T E L R K P E T E D L P
Sm017809_Selmo1    E E H F K T K R H K K R V K A M Q G P A P H C Q L D A E L A A G Q G K P D N G P K L - - - - - - - - - - - - - - - - - -
pp003562_Pp1s37    D E H Y K T K K H R R R V K L M E G P A P H N Q I D A E V A A G M G T P D N G P K L - - - - - - - - - - - - - - - - - -
 
AT2G36930.1     G M G Q F N C L L C H R N F S N A S V M D Y H F K T K K H K K R V K K I E R P A P H S Q L D A D L A G G M G M P D N G P
Sm017809_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp003562_Pp1s37    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R V G E D F A L D M - - - - - - -
 
AT2G36930.1     K L M S A
Sm017809_Selmo1    G V V S S
pp003562_Pp1s37    - - - - -
 
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