fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp003562 not found in 226aa AT2G36930.1 1st_1st 0.345268542 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36930.1     ---------MGR------------------------------------------------
pp003562_Pp1s37 MKNGRRMNVYGRFTSSGCMCEELELSAPSSKGLPPQPELPLLVWRSALRRIPWPWSILTC
                          **                                                

AT2G36930.1     -------------------CPTR----------------------------------KVK
pp003562_Pp1s37 KAGVLLGVVGLQLWTWELGCCTKGLNFFLWKCTCDEKLQQFAAVVCAATVHFILNLHKMK
                                   * *:                                  *:*

AT2G36930.1     KRRLSHKTARRDKFEVKGDDLVYTELRKPETEIKPLQLDEDLPGMGQFYCLHCDRYFSNV
pp003562_Pp1s37 RFSLDILRAR--------DDMIHTELRKVETP-KSKELDPDLPGMGQFYCLHCDRHFTNT
                :  *.   **        **:::***** **  *. :** ***************:*:*.

AT2G36930.1     SVRDDHFKTKKHKKRVNMMMGQAPHSQLDADLAGGMGMPDNGPKLMSNLVFTELRKPETE
pp003562_Pp1s37 TIRDEHYKTKKHRRRVKLMEGPAPHNQIDAEVAAGMGTPDNGPKL---------------
                ::**:*:*****::**::* * ***.*:**::*.*** *******               

AT2G36930.1     DLPGMGQFNCLLCHRNFSNASVMDYHFKTKKHKKRVKKIERPAPHSQLDADLAGGMGMPD
pp003562_Pp1s37 ----------------------------------------------RVGEDFALDM----
                                                              ::. *:* .*    

AT2G36930.1     NGPKLMSA
pp003562_Pp1s37 --------
BoxShade v3.31 C (beta, 970507) Output
AT2G36930.1     - - - - - - - - - M G R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp003562_Pp1s37    M K N G R R M N V Y G R F T S S G C M C E E L E L S A P S S K G L P P Q P E L P L L V W R S A L R R I P W P W S I L T C
 
AT2G36930.1     - - - - - - - - - - - - - - - - - - - C P T R - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - K V K
pp003562_Pp1s37    K A G V L L G V V G L Q L W T W E L G C C T K G L N F F L W K C T C D E K L Q Q F A A V V C A A T V H F I L N L H K M K
 
AT2G36930.1     K R R L S H K T A R R D K F E V K G D D L V Y T E L R K P E T E I K P L Q L D E D L P G M G Q F Y C L H C D R Y F S N V
pp003562_Pp1s37    R F S L D I L R A R - - - - - - - - D D M I H T E L R K V E T P - K S K E L D P D L P G M G Q F Y C L H C D R H F T N T
 
AT2G36930.1     S V R D D H F K T K K H K K R V N M M M G Q A P H S Q L D A D L A G G M G M P D N G P K L M S N L V F T E L R K P E T E
pp003562_Pp1s37    T I R D E H Y K T K K H R R R V K L M E G P A P H N Q I D A E V A A G M G T P D N G P K L - - - - - - - - - - - - - - -
 
AT2G36930.1     D L P G M G Q F N C L L C H R N F S N A S V M D Y H F K T K K H K K R V K K I E R P A P H S Q L D A D L A G G M G M P D
pp003562_Pp1s37    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - R V G E D F A L D M - - - -
 
AT2G36930.1     N G P K L M S A
pp003562_Pp1s37    - - - - - - - -
 
0