fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt006990 not found in 120aa AT2G36930.1 not_1st 0.480818414 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36930.1     -MGRCPTRKVKKRRLSHKTARRDKFEVKGDDLVYTELRKPETEIKP-LQLDEDLPGMGQF
pt006990_POPTR_ MGGKCPSRKVKKRRYSHKTARRSKFLLKADDAVYEELQKPDGEMKSILPLDEDLPGMGQY
                  *:**:******* *******.** :*.** ** **:**: *:*. * **********:

AT2G36930.1     YCLHCDRYFSNVSVRDDHFKTKKHKKRVNMMMGQAPHSQLDADLAGGMGMPDNGPKLMSN
pt006990_POPTR_ YCLHCDRYFANVTVRDEHFKTKRHKKRVKQMMG---------------------------
                *********:**:***:*****:*****: ***                           

AT2G36930.1     LVFTELRKPETEDLPGMGQFNCLLCHRNFSNASVMDYHFKTKKHKKRVKKIERPAPHSQL
pt006990_POPTR_ -----------------------------------------------------PAPHTQL
                                                                     ****:**

AT2G36930.1     DADLAGGMGMPDNGPKLMSA
pt006990_POPTR_ DAELAAGMGAPDNGLKLMSM
                **:**.*** **** ****
BoxShade v3.31 C (beta, 970507) Output
AT2G36930.1     - M G R C P T R K V K K R R L S H K T A R R D K F E V K G D D L V Y T E L R K P E T E I K P - L Q L D E D L P G M G Q F
pt006990_POPTR_    M G G K C P S R K V K K R R Y S H K T A R R S K F L L K A D D A V Y E E L Q K P D G E M K S I L P L D E D L P G M G Q Y
 
AT2G36930.1     Y C L H C D R Y F S N V S V R D D H F K T K K H K K R V N M M M G Q A P H S Q L D A D L A G G M G M P D N G P K L M S N
pt006990_POPTR_    Y C L H C D R Y F A N V T V R D E H F K T K R H K K R V K Q M M G - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G36930.1     L V F T E L R K P E T E D L P G M G Q F N C L L C H R N F S N A S V M D Y H F K T K K H K K R V K K I E R P A P H S Q L
pt006990_POPTR_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P A P H T Q L
 
AT2G36930.1     D A D L A G G M G M P D N G P K L M S A
pt006990_POPTR_    D A E L A A G M G A P D N G L K L M S M
 
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