Input
| Putative repression domain
|
|
AT2G36930.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt044616 |
not found in 122aa |
AT2G36930.1 |
1st_1st |
0.480818414 |
Ia |
Pt006990 |
not found in 120aa |
AT2G36930.1 |
not_1st |
0.480818414 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT2G36930.1 -MGRCPTRKVKKRRLSHKTARRDKFEVKGDDLVYTEL-RKPETEIK--PLQLDEDLPGMG
pt006990_POPTR_ MGGKCPSRKVKKRRYSHKTARRSKFLLKADDAVYEEL-QKPDGEMK-SILPLDEDLPGMG
pt044616_POPTR_ MGGKCPSRKVKKRRYSHKTARRSKFLLKGDDAVYEELQQKPDGEMKEATLPLDEDLPGMG
*:**:******* *******.** :*.** ** ** :**: *:* * *********
AT2G36930.1 QFYCLHCDRYFSNVSVRDDHFKTKKHKKRVNMMMGQAPHSQLDADLAGGMGMPDNGPKLM
pt006990_POPTR_ QYYCLHCDRYFANVTVRDEHFKTKRHKKRVKQMMG-------------------------
pt044616_POPTR_ QYYCLHCDRYFANVSVRDEHFKTKRHKKRVKQMMG-------------------------
*:*********:**:***:*****:*****: ***
AT2G36930.1 SNLVFTELRKPETEDLPGMGQFNCLLCHRNFSNASVMDYHFKTKKHKKRVKKIERPAPHS
pt006990_POPTR_ -------------------------------------------------------PAPHT
pt044616_POPTR_ -------------------------------------------------------PAPHT
****:
AT2G36930.1 QLDADLAGGMGMPDNGPKLMSA
pt006990_POPTR_ QLDAELAAGMGAPDNGLKLMSM
pt044616_POPTR_ QLDADLAAGMGAPDNGLKLMSM
****:**.*** **** ****
BoxShade v3.31 C (beta, 970507) Output
AT2G36930.1 |
- |
M |
G |
R |
C |
P |
T |
R |
K |
V |
K |
K |
R |
R |
L |
S |
H |
K |
T |
A |
R |
R |
D |
K |
F |
E |
V |
K |
G |
D |
D |
L |
V |
Y |
T |
E |
L |
- |
R |
K |
P |
E |
T |
E |
I |
K |
- |
- |
P |
L |
Q |
L |
D |
E |
D |
L |
P |
G |
M |
G |
pt006990_POPTR_ |
M |
G |
G |
K |
C |
P |
S |
R |
K |
V |
K |
K |
R |
R |
Y |
S |
H |
K |
T |
A |
R |
R |
S |
K |
F |
L |
L |
K |
A |
D |
D |
A |
V |
Y |
E |
E |
L |
- |
Q |
K |
P |
D |
G |
E |
M |
K |
- |
S |
I |
L |
P |
L |
D |
E |
D |
L |
P |
G |
M |
G |
pt044616_POPTR_ |
M |
G |
G |
K |
C |
P |
S |
R |
K |
V |
K |
K |
R |
R |
Y |
S |
H |
K |
T |
A |
R |
R |
S |
K |
F |
L |
L |
K |
G |
D |
D |
A |
V |
Y |
E |
E |
L |
Q |
Q |
K |
P |
D |
G |
E |
M |
K |
E |
A |
T |
L |
P |
L |
D |
E |
D |
L |
P |
G |
M |
G |
|
AT2G36930.1 |
Q |
F |
Y |
C |
L |
H |
C |
D |
R |
Y |
F |
S |
N |
V |
S |
V |
R |
D |
D |
H |
F |
K |
T |
K |
K |
H |
K |
K |
R |
V |
N |
M |
M |
M |
G |
Q |
A |
P |
H |
S |
Q |
L |
D |
A |
D |
L |
A |
G |
G |
M |
G |
M |
P |
D |
N |
G |
P |
K |
L |
M |
pt006990_POPTR_ |
Q |
Y |
Y |
C |
L |
H |
C |
D |
R |
Y |
F |
A |
N |
V |
T |
V |
R |
D |
E |
H |
F |
K |
T |
K |
R |
H |
K |
K |
R |
V |
K |
Q |
M |
M |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt044616_POPTR_ |
Q |
Y |
Y |
C |
L |
H |
C |
D |
R |
Y |
F |
A |
N |
V |
S |
V |
R |
D |
E |
H |
F |
K |
T |
K |
R |
H |
K |
K |
R |
V |
K |
Q |
M |
M |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
|
AT2G36930.1 |
S |
N |
L |
V |
F |
T |
E |
L |
R |
K |
P |
E |
T |
E |
D |
L |
P |
G |
M |
G |
Q |
F |
N |
C |
L |
L |
C |
H |
R |
N |
F |
S |
N |
A |
S |
V |
M |
D |
Y |
H |
F |
K |
T |
K |
K |
H |
K |
K |
R |
V |
K |
K |
I |
E |
R |
P |
A |
P |
H |
S |
pt006990_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
A |
P |
H |
T |
pt044616_POPTR_ |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
A |
P |
H |
T |
|
AT2G36930.1 |
Q |
L |
D |
A |
D |
L |
A |
G |
G |
M |
G |
M |
P |
D |
N |
G |
P |
K |
L |
M |
S |
A |
pt006990_POPTR_ |
Q |
L |
D |
A |
E |
L |
A |
A |
G |
M |
G |
A |
P |
D |
N |
G |
L |
K |
L |
M |
S |
M |
pt044616_POPTR_ |
Q |
L |
D |
A |
D |
L |
A |
A |
G |
M |
G |
A |
P |
D |
N |
G |
L |
K |
L |
M |
S |
M |
|
|