fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb030974 not found in 292aa AT2G36930.1 1st_1st 0.439897698 Ia
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36930.1     -----------MGRCPTRKVKKRRLSHKTARRDKFEVKGDDLVYTELRK-----PETEIK
Sb030974_Sorbi1 PPPPSLLFVEMGGKCPHRKVKKRRLSHKTARRGKFLLKADDAVYDELVKLADQGKDAEGK
                            *:** ***************.** :*.** ** ** *      ::* *

AT2G36930.1     PLQLDEDLPGMGQFYCLHCDRYFSNVSVRDDHFKTKKHKKRVNMMMGQAPHSQLDADLAG
Sb030974_Sorbi1 ELPVDEDLPGMGQFYCLHCDRYFASESVKDDHYRSKRHKKRVKVMSG-------------
                 * :*******************:. **:***:::*:*****::* *             

AT2G36930.1     GMGMPDNGPKLMSNLVFTELRKPETEDLPGMGQFNCLLCHRNFSNASVMDYHFKTKKHKK
Sb030974_Sorbi1 ------------------------------------------------------------
                                                                            

AT2G36930.1     RVKKIERPAPHSQLDADLAGGMGMPDNGPKLMSA
Sb030974_Sorbi1 -------PAPHTQLDAELAAGMGKPDNGLKLMSM
                       ****:****:**.*** **** ****
BoxShade v3.31 C (beta, 970507) Output
AT2G36930.1     - - - - - - - - - - - M G R C P T R K V K K R R L S H K T A R R D K F E V K G D D L V Y T E L R K - - - - - P E T E I K
Sb030974_Sorbi1    P P P P S L L F V E M G G K C P H R K V K K R R L S H K T A R R G K F L L K A D D A V Y D E L V K L A D Q G K D A E G K
 
AT2G36930.1     P L Q L D E D L P G M G Q F Y C L H C D R Y F S N V S V R D D H F K T K K H K K R V N M M M G Q A P H S Q L D A D L A G
Sb030974_Sorbi1    E L P V D E D L P G M G Q F Y C L H C D R Y F A S E S V K D D H Y R S K R H K K R V K V M S G - - - - - - - - - - - - -
 
AT2G36930.1     G M G M P D N G P K L M S N L V F T E L R K P E T E D L P G M G Q F N C L L C H R N F S N A S V M D Y H F K T K K H K K
Sb030974_Sorbi1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G36930.1     R V K K I E R P A P H S Q L D A D L A G G M G M P D N G P K L M S A
Sb030974_Sorbi1    - - - - - - - P A P H T Q L D A E L A A G M G K P D N G L K L M S M
 
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