fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G36930.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm026898 not found in 119aa AT2G36930.1 not_1st 0.511508951 II
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Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G36930.1     -MGRCPTRKVKKRRLSHKTARRDKFEVKGDDLVYTELRKPETEIKPLQLDEDLPGMGQFY
gm026898_Glyma1 MGGKCPHRNVKKRRYSHKTARRTKFELKGDDMVYAQLNKPDQERPPLPVDEDLPGMGQYY
                  *:** *:***** ******* ***:****:**::*.**: *  ** :*********:*

AT2G36930.1     CLHCDRYFSNVSVRDDHFKTKKHKKRVNMMMGQAPHSQLDADLAGGMGMPDNGPKLMSNL
gm026898_Glyma1 CLHCDRYFANITVRDEHFKTKRHKKRIKQMMG----------------------------
                ********:*::***:*****:****:: ***                            

AT2G36930.1     VFTELRKPETEDLPGMGQFNCLLCHRNFSNASVMDYHFKTKKHKKRVKKIERPAPHSQLD
gm026898_Glyma1 ----------------------------------------------------PAPHTQLD
                                                                    ****:***

AT2G36930.1     ADLAGGMGMPDNGPKLMSA
gm026898_Glyma1 ADLASGMGMPDNGPKLMSM
                ****.*************
BoxShade v3.31 C (beta, 970507) Output
AT2G36930.1     - M G R C P T R K V K K R R L S H K T A R R D K F E V K G D D L V Y T E L R K P E T E I K P L Q L D E D L P G M G Q F Y
gm026898_Glyma1    M G G K C P H R N V K K R R Y S H K T A R R T K F E L K G D D M V Y A Q L N K P D Q E R P P L P V D E D L P G M G Q Y Y
 
AT2G36930.1     C L H C D R Y F S N V S V R D D H F K T K K H K K R V N M M M G Q A P H S Q L D A D L A G G M G M P D N G P K L M S N L
gm026898_Glyma1    C L H C D R Y F A N I T V R D E H F K T K R H K K R I K Q M M G - - - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G36930.1     V F T E L R K P E T E D L P G M G Q F N C L L C H R N F S N A S V M D Y H F K T K K H K K R V K K I E R P A P H S Q L D
gm026898_Glyma1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - P A P H T Q L D
 
AT2G36930.1     A D L A G G M G M P D N G P K L M S A
gm026898_Glyma1    A D L A S G M G M P D N G P K L M S M
 
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