fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G37000.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt007470 not found in 198aa AT2G37000.1 1st_1st 0.407407407 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G37000.1     MIFQNVC--------RNESNFN---------AIASESRSQTQFGVSKSSSSGGGCISART
pt007470_POPTR_ MVLYNLSSTSNNHHHQQNSNLNNNNHVVPTTIPAASSGSDSKLAHPRKST------ASQS
                *:: *:.        :::**:*           *:.* *::::. .:.*:      ::::

AT2G37000.1     KDRHTKVNGRSRRVTMPALAAARIFQLTRELGHKTEGETIEWLLSQAEPSIIAATGYGT-
pt007470_POPTR_ KDRHTKVNGRGRRVRMPALTAARVFQLTRELGHRSDGETIEWLLRNAEASIIAATGTGTI
                **********.*** ****:***:*********:::******** :**.******* ** 

AT2G37000.1     KLISNWVDVAADDSSSSSSMTSPQTQTQTPQSP--------SCRLDLCQPIGIQYPVNGY
pt007470_POPTR_ PSIPISTTVGSAPTSASPLSVSGEVHPAIDTGPDGFSLTEASCRLDL-----------DY
                  *.  . *.:  :*:*.  .* :.:.    .*        ******           .*

AT2G37000.1     SHMPFTAMLLEPMTTTAESEVEIAEEEERRRRHH-
pt007470_POPTR_ RHMPFTALLLKPLSENVDLEAEEGRQEEVIGEQKM
                 ******:**:*:: ..: *.* ..:**   .::
BoxShade v3.31 C (beta, 970507) Output
AT2G37000.1     M I F Q N V C - - - - - - - - R N E S N F N - - - - - - - - - A I A S E S R S Q T Q F G V S K S S S S G G G C I S A R T
pt007470_POPTR_    M V L Y N L S S T S N N H H H Q Q N S N L N N N N H V V P T T I P A A S S G S D S K L A H P R K S T - - - - - - A S Q S
 
AT2G37000.1     K D R H T K V N G R S R R V T M P A L A A A R I F Q L T R E L G H K T E G E T I E W L L S Q A E P S I I A A T G Y G T -
pt007470_POPTR_    K D R H T K V N G R G R R V R M P A L T A A R V F Q L T R E L G H R S D G E T I E W L L R N A E A S I I A A T G T G T I
 
AT2G37000.1     K L I S N W V D V A A D D S S S S S S M T S P Q T Q T Q T P Q S P - - - - - - - - S C R L D L C Q P I G I Q Y P V N G Y
pt007470_POPTR_    P S I P I S T T V G S A P T S A S P L S V S G E V H P A I D T G P D G F S L T E A S C R L D L - - - - - - - - - - - D Y
 
AT2G37000.1     S H M P F T A M L L E P M T T T A E S E V E I A E E E E R R R R H H -
pt007470_POPTR_    R H M P F T A L L L K P L S E N V D L E A E E G R Q E E V I G E Q K M
 
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