fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G37060.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp018837 not found in 218aa AT4G14540.1 1st_not 0.549295774 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G37060.3     MAESQAKSPGGC-----GSHESGG------DQSPRSLHVREQDRFLPIANISRIMKRGLP
pp018837_Pp1s46 MADSYGHNPGSPENDPHSDNESGGGHYRDHDAS-----VREQDRFLPIANVSRIMKKALP
                **:* .:.**.      ..:****      * *     ************:*****:.**

AT2G37060.3     ANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEP
pp018837_Pp1s46 SNAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEP
                :*.**:***** ***********:*.***********************:*******:**

AT2G37060.3     LKVYLMRYREMEGDTKGSAKGGDPNA-KKDGQSSQ---------------NGQFSQ----
pp018837_Pp1s46 LKVYLHKYRELEGEKTSVTKGGDHSAGKESNQSNQGGIGSLGMPGGMIGMNGSMHQQGIP
                ***** :***:**:... :**** .* *:..**.*               **.: *    

AT2G37060.3     ---------LAHQGPYG-----NSQAQQHMMVPMPGTD-----
pp018837_Pp1s46 VSMQMMQQSYGHQSPLGMMFAPHQTIPQYQMSMQSGSNQSRGL
                          .**.* *     :.   *: *   .*::
BoxShade v3.31 C (beta, 970507) Output
AT2G37060.3     M A E S Q A K S P G G C - - - - - G S H E S G G - - - - - - D Q S P R S L H V R E Q D R F L P I A N I S R I M K R G L P
pp018837_Pp1s46    M A D S Y G H N P G S P E N D P H S D N E S G G G H Y R D H D A S - - - - - V R E Q D R F L P I A N V S R I M K K A L P
 
AT2G37060.3     A N G K I A K D A K E I V Q E C V S E F I S F V T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y M E P
pp018837_Pp1s46    S N A K I S K D A K E T V Q E C V S E F I S F I T G E A S D K C Q R E K R K T I N G D D L L W A M S T L G F E D Y V E P
 
AT2G37060.3     L K V Y L M R Y R E M E G D T K G S A K G G D P N A - K K D G Q S S Q - - - - - - - - - - - - - - - N G Q F S Q - - - -
pp018837_Pp1s46    L K V Y L H K Y R E L E G E K T S V T K G G D H S A G K E S N Q S N Q G G I G S L G M P G G M I G M N G S M H Q Q G I P
 
AT2G37060.3     - - - - - - - - - L A H Q G P Y G - - - - - N S Q A Q Q H M M V P M P G T D - - - - -
pp018837_Pp1s46    V S M Q M M Q Q S Y G H Q S P L G M M F A P H Q T I P Q Y Q M S M Q S G S N Q S R G L
 
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