fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G37060.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt043410 not found in 176aa AT3G53340.1 1st_not 0.690140845 II
Pt041090 not found in 189aa AT2G37060.3 not_1st 0.647887323 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G37060.3     MAESQAKSPGGCGSHESGGDQSPRS-LHVREQDRFLPIANISRIMKRGLPANGKIAKDAK
pt043410_POPTR_ MAAEAPASPGG-GSHES-GDQSPRSNSNVREQDRFLPIANISRIMKKALPANGKIAKDAK
pt041090_POPTR_ -MADNPTSPAA-GSHESGGEQSPRS--GVREQDRYLPIANISRIMKKALPANGKIAKDAK
                   . . **.. ***** *:*****   ******:***********:.************

AT2G37060.3     EIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYRE
pt043410_POPTR_ ETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKIYLSRYRE
pt041090_POPTR_ DTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARYRE
                : ***********:*********:***********************::***:** ****

AT2G37060.3     MEGDTKGSAKGGDPNAKKD---GQSSQNGQFSQLAHQG------PYGNSQ------AQQ-
pt043410_POPTR_ MEGDTKGSAKTGDTSAKKD---IHPGPNAQIS---HQGSFSQGVSYGNSN------SQAP
pt041090_POPTR_ LEGDAKGSARGGDGSSKRDAVGGLPGQNAQFA---FQGSM----NYTSPQHCLHLSPKDP
                :***:****: ** .:*:*     .. *.*::   .**       * ..:      .:  

AT2G37060.3     HMMVP-----------MPGTD
pt043410_POPTR_ HMMVP-----------MQSNE
pt041090_POPTR_ HIFNPGLIGKTGLTKCLAKN-
                *:: *           :  .
BoxShade v3.31 C (beta, 970507) Output
AT2G37060.3     M A E S Q A K S P G G C G S H E S G G D Q S P R S - L H V R E Q D R F L P I A N I S R I M K R G L P A N G K I A K D A K
pt043410_POPTR_    M A A E A P A S P G G - G S H E S - G D Q S P R S N S N V R E Q D R F L P I A N I S R I M K K A L P A N G K I A K D A K
pt041090_POPTR_    - M A D N P T S P A A - G S H E S G G E Q S P R S - - G V R E Q D R Y L P I A N I S R I M K K A L P A N G K I A K D A K
 
AT2G37060.3     E I V Q E C V S E F I S F V T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y M E P L K V Y L M R Y R E
pt043410_POPTR_    E T V Q E C V S E F I S F I T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y I D P L K I Y L S R Y R E
pt041090_POPTR_    D T V Q E C V S E F I S F V T S E A S D K C Q K E K R K T I N G D D L L W A M A T L G F E D Y I E P L K V Y L A R Y R E
 
AT2G37060.3     M E G D T K G S A K G G D P N A K K D - - - G Q S S Q N G Q F S Q L A H Q G - - - - - - P Y G N S Q - - - - - - A Q Q -
pt043410_POPTR_    M E G D T K G S A K T G D T S A K K D - - - I H P G P N A Q I S - - - H Q G S F S Q G V S Y G N S N - - - - - - S Q A P
pt041090_POPTR_    L E G D A K G S A R G G D G S S K R D A V G G L P G Q N A Q F A - - - F Q G S M - - - - N Y T S P Q H C L H L S P K D P
 
AT2G37060.3     H M M V P - - - - - - - - - - - M P G T D
pt043410_POPTR_    H M M V P - - - - - - - - - - - M Q S N E
pt041090_POPTR_    H I F N P G L I G K T G L T K C L A K N -
 
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