fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G37060.3 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007396 not found in 171aa AT3G53340.1 1st_not 0.709859154 II
Gm028166 not found in 174aa AT2G37060.3 not_1st 0.616901408 II
Gm028165 not found in 174aa AT2G37060.3 not_1st 0.616901408 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G37060.3     MAESQAKSPGGCGSHESGGDQSPR---SLHVREQDRFLPIANISRIMKRGLPANGKIAKD
gm028165_Glyma1 MSDAPA-SP----SHESGGEQSPRGSLSGAAREQDRYLPIANISRIMKKALPPNGKIAKD
gm028166_Glyma1 MSDAPA-SP----SHESGGEQSPRGSLSGAAREQDRYLPIANISRIMKKALPPNGKIAKD
gm007396_Glyma0 MADGPA-SPGG-GSHES-GDHSPR---S-NVREQDRYLPIANISRIMKKALPANGKIAKD
                *::. * **    **** *::***   *  .*****:***********:.**.*******

AT2G37060.3     AKEIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRY
gm028165_Glyma1 AKDTMQECVSEFISFITSEASEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARY
gm028166_Glyma1 AKDTMQECVSEFISFITSEASEKCQKEKRKTINGDDLLWAMATLGFEDYIEPLKVYLARY
gm007396_Glyma0 AKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYMDPLKIYLTRY
                **: :**********:*****:***:***********************::***:** **

AT2G37060.3     REMEGDTKGSAKGGDPNAKKD--GQSSQNGQFSQLAHQGP------YGNSQAQ-QHMMVP
gm028165_Glyma1 REAEGDTKGSARSGDGSARPDQVGLAGQN---AQLVHQGSLN----YIGLQVQPQHLVMP
gm028166_Glyma1 REAEGDTKGSARSGDGSARPDQVGLAGQN---AQLVHQGSLN----YIGLQVQPQHLVMP
gm007396_Glyma0 REMEGDTKGSAKGGDSSAKRD--VQPSPN---AQLAHQGSFSQNVTYPNSQG--QHMMVP
                ** ********:.** .*: *    .. *   :**.***.      * . *   **:::*

AT2G37060.3     -MPGTD
gm028165_Glyma1 SMQGHE
gm028166_Glyma1 SMQGHE
gm007396_Glyma0 -MQGPE
                 * * :
BoxShade v3.31 C (beta, 970507) Output
AT2G37060.3     M A E S Q A K S P G G C G S H E S G G D Q S P R - - - S L H V R E Q D R F L P I A N I S R I M K R G L P A N G K I A K D
gm028165_Glyma1    M S D A P A - S P - - - - S H E S G G E Q S P R G S L S G A A R E Q D R Y L P I A N I S R I M K K A L P P N G K I A K D
gm028166_Glyma1    M S D A P A - S P - - - - S H E S G G E Q S P R G S L S G A A R E Q D R Y L P I A N I S R I M K K A L P P N G K I A K D
gm007396_Glyma0    M A D G P A - S P G G - G S H E S - G D H S P R - - - S - N V R E Q D R Y L P I A N I S R I M K K A L P A N G K I A K D
 
AT2G37060.3     A K E I V Q E C V S E F I S F V T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y M E P L K V Y L M R Y
gm028165_Glyma1    A K D T M Q E C V S E F I S F I T S E A S E K C Q K E K R K T I N G D D L L W A M A T L G F E D Y I E P L K V Y L A R Y
gm028166_Glyma1    A K D T M Q E C V S E F I S F I T S E A S E K C Q K E K R K T I N G D D L L W A M A T L G F E D Y I E P L K V Y L A R Y
gm007396_Glyma0    A K E T V Q E C V S E F I S F I T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y M D P L K I Y L T R Y
 
AT2G37060.3     R E M E G D T K G S A K G G D P N A K K D - - G Q S S Q N G Q F S Q L A H Q G P - - - - - - Y G N S Q A Q - Q H M M V P
gm028165_Glyma1    R E A E G D T K G S A R S G D G S A R P D Q V G L A G Q N - - - A Q L V H Q G S L N - - - - Y I G L Q V Q P Q H L V M P
gm028166_Glyma1    R E A E G D T K G S A R S G D G S A R P D Q V G L A G Q N - - - A Q L V H Q G S L N - - - - Y I G L Q V Q P Q H L V M P
gm007396_Glyma0    R E M E G D T K G S A K G G D S S A K R D - - V Q P S P N - - - A Q L A H Q G S F S Q N V T Y P N S Q G - - Q H M M V P
 
AT2G37060.3     - M P G T D
gm028165_Glyma1    S M Q G H E
gm028166_Glyma1    S M Q G H E
gm007396_Glyma0    - M Q G P E
 
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