fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G37430.1 SKRILSLDLNLTPLEN at 147/178 in AT2G37430.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm007347 TRVIMCLDLNLTPFEN in 143/173 AT2G37430.1 not_1st 0.426865671 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G37430.1     MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQ
gm007347_Glyma0 MKRQR-DF-EGFESIDLANCLMMLSHPQQNKKL-LQTKIE---AVKFECKTCNRKFSSFQ
                ***:* ** *.::.**:*:***:*::..  *:: *: : *   : :*******::*****

AT2G37430.1     ALGGHRASHKKPKLTVEQKDVK-HLSNDYKGN--HFHKCSICSQSFGTGQALGGHMRRHR
gm007347_Glyma0 ALGGHRASHKRSKL--EGDELKAHAISLSLGNKPKMHECSICGQEFSLGQALGGHMRRHR
                **********:.**  * .::* *  .   **  ::*:****.*.*. ************

AT2G37430.1     SSMTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFVPK----ID
gm007347_Glyma0 TTINEDFSSIKQVITQVPDLKRSNSTRVIMCLDLNLTPFENDLKLLFGK-MAPNSGALVD
                :::. : * *. :*..:* ***..*:: *:.*******:****: :*** :.*:    :*

AT2G37430.1     MKFVL
gm007347_Glyma0 SL---
BoxShade v3.31 C (beta, 970507) Output
AT2G37430.1     M K R E R S D F E E S L K N I D I A K C L M I L A Q T S M V K Q I G L N Q H T E S H T S N Q F E C K T C N K R F S S F Q
gm007347_Glyma0    M K R Q R - D F - E G F E S I D L A N C L M M L S H P Q Q N K K L - L Q T K I E - - - A V K F E C K T C N R K F S S F Q
 
AT2G37430.1     A L G G H R A S H K K P K L T V E Q K D V K - H L S N D Y K G N - - H F H K C S I C S Q S F G T G Q A L G G H M R R H R
gm007347_Glyma0    A L G G H R A S H K R S K L - - E G D E L K A H A I S L S L G N K P K M H E C S I C G Q E F S L G Q A L G G H M R R H R
 
AT2G37430.1     S S M T V E P S F I S P M I P S M P V L K R C G S S K R I L S L D L N L T P L E N D L E Y I F G K T F V P K - - - - I D
gm007347_Glyma0    T T I N E D F S S I K Q V I T Q V P D L K R S N S T R V I M C L D L N L T P F E N D L K L L F G K - M A P N S G A L V D
 
AT2G37430.1     M K F V L
gm007347_Glyma0    S L - - -
 
0