Input
| Putative repression domain
|
|
AT2G37430.1 |
SKRILSLDLNLTPLEN at 147/178 in AT2G37430.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt028209 |
SKRVLCLDLSLALPMY in 168/198 |
AT2G37430.1 |
1st_1st |
0.361194029 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G37430.1 MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTS-------------NQF
pt028209_POPTR_ MKRDREQAE-----IDLAKCLMLLSKVGQADHEILTNYRSAAAAAAAATAGAGAGAGRSF
***:*.: * **:*****:*::.. ..: *.:: .: :: ..*
AT2G37430.1 ECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQ
pt028209_POPTR_ SCKTCNKNFPSFQALGGHRASHKKPKLKESTGNLLKLPNSPSKPKTHQCSICGLEFPLGQ
.******.*.*****************. . :: :*.*. . : *:****. .* **
AT2G37430.1 ALGGHMRRHRSSMTVEPSFIS------------PMIPSMPVLKRCGSSKRILSLDLNLT-
pt028209_POPTR_ ALGGHMRRHRAPHNVDTTSTSSKDHELAAVTQPPFLPAVPVLKRSNSSKRVLCLDLSLAL
**********:. .*:.: * *::*::*****..****:*.***.*:
AT2G37430.1 PL-ENDLEYIFGKTFVPKIDMKFVL
pt028209_POPTR_ PMYQNDSELQLEKVDRPMLRC-FI-
*: :** * : *. * : *:
BoxShade v3.31 C (beta, 970507) Output
AT2G37430.1 |
M |
K |
R |
E |
R |
S |
D |
F |
E |
E |
S |
L |
K |
N |
I |
D |
I |
A |
K |
C |
L |
M |
I |
L |
A |
Q |
T |
S |
M |
V |
K |
Q |
I |
G |
L |
N |
Q |
H |
T |
E |
S |
H |
T |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
Q |
F |
pt028209_POPTR_ |
M |
K |
R |
D |
R |
E |
Q |
A |
E |
- |
- |
- |
- |
- |
I |
D |
L |
A |
K |
C |
L |
M |
L |
L |
S |
K |
V |
G |
Q |
A |
D |
H |
E |
I |
L |
T |
N |
Y |
R |
S |
A |
A |
A |
A |
A |
A |
A |
A |
T |
A |
G |
A |
G |
A |
G |
A |
G |
R |
S |
F |
|
AT2G37430.1 |
E |
C |
K |
T |
C |
N |
K |
R |
F |
S |
S |
F |
Q |
A |
L |
G |
G |
H |
R |
A |
S |
H |
K |
K |
P |
K |
L |
T |
V |
E |
Q |
K |
D |
V |
K |
H |
L |
S |
N |
D |
Y |
K |
G |
N |
H |
F |
H |
K |
C |
S |
I |
C |
S |
Q |
S |
F |
G |
T |
G |
Q |
pt028209_POPTR_ |
S |
C |
K |
T |
C |
N |
K |
N |
F |
P |
S |
F |
Q |
A |
L |
G |
G |
H |
R |
A |
S |
H |
K |
K |
P |
K |
L |
K |
E |
S |
T |
G |
N |
L |
L |
K |
L |
P |
N |
S |
P |
S |
K |
P |
K |
T |
H |
Q |
C |
S |
I |
C |
G |
L |
E |
F |
P |
L |
G |
Q |
|
AT2G37430.1 |
A |
L |
G |
G |
H |
M |
R |
R |
H |
R |
S |
S |
M |
T |
V |
E |
P |
S |
F |
I |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
M |
I |
P |
S |
M |
P |
V |
L |
K |
R |
C |
G |
S |
S |
K |
R |
I |
L |
S |
L |
D |
L |
N |
L |
T |
- |
pt028209_POPTR_ |
A |
L |
G |
G |
H |
M |
R |
R |
H |
R |
A |
P |
H |
N |
V |
D |
T |
T |
S |
T |
S |
S |
K |
D |
H |
E |
L |
A |
A |
V |
T |
Q |
P |
P |
F |
L |
P |
A |
V |
P |
V |
L |
K |
R |
S |
N |
S |
S |
K |
R |
V |
L |
C |
L |
D |
L |
S |
L |
A |
L |
|
AT2G37430.1 |
P |
L |
- |
E |
N |
D |
L |
E |
Y |
I |
F |
G |
K |
T |
F |
V |
P |
K |
I |
D |
M |
K |
F |
V |
L |
pt028209_POPTR_ |
P |
M |
Y |
Q |
N |
D |
S |
E |
L |
Q |
L |
E |
K |
V |
D |
R |
P |
M |
L |
R |
C |
- |
F |
I |
- |
|
|