fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G37430.1 SKRILSLDLNLTPLEN at 147/178 in AT2G37430.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm052410 TRVVTCLDLNLTPLEN in 144/171 AT2G37430.1 1st_1st 0.426865671 Ia
Gm007347 TRVIMCLDLNLTPFEN in 143/173 AT2G37430.1 not_1st 0.426865671 II
Pt028209 SKRVLCLDLSLALPMY in 168/198 AT2G37430.1 1st_1st 0.361194029 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G37430.1     MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESH-------------TSNQF
gm007347_Glyma0 MKRQR-DF-EGFESIDLANCLMMLSHPQQNKKL-LQTKIE----------------AVKF
gm052410_Glyma1 MKRQR-DF-KGFESIDLANCLMMLSHPQQNEKL-LQKKIE----------------AVEF
pt028209_POPTR_ MKRDR----EQAE-IDLAKCLMLLSKVGQADHEILTNYRSAAAAAAAATAGAGAGAGRSF
                ***:*    :  : **:*:***:*::    .:  *    .                . .*

AT2G37430.1     ECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKH-----LSNDYKGNHFHKCSICSQS
gm007347_Glyma0 ECKTCNRKFSSFQALGGHRASHKRSKLEGD-ELKAHAISLSLGNKPK---MHECSICGQE
gm052410_Glyma1 ECKTCNRKFSSFQALGGHRASHKRSKLEGDHELKAHAISLSLANKPK---MHECSICGQE
pt028209_POPTR_ SCKTCNKNFPSFQALGGHRASHKKPKLK---ESTGN--LLKLPNSPSKPKTHQCSICGLE
                .*****:.*.*************:.**    :   :     * *. .    *:****. .

AT2G37430.1     FGTGQALGGHMRRHRSSMTVEPSFIS------------PMIPSMPVLKRCGSSKRILSLD
gm007347_Glyma0 FSLGQALGGHMRRHRTTINEDFSSIK------------QVITQVPDLKRSNSTRVIMCLD
gm052410_Glyma1 FSLGQALGGHMRRHRTTIHEDFSSIK------------QVITQMPVLKRSNSTRVVTCLD
pt028209_POPTR_ FPLGQALGGHMRRHRAPHNVDTTSTSSKDHELAAVTQPPFLPAVPVLKRSNSSKRVLCLD
                *  ************:.   : :  .             .:. :* ***..*:: : .**

AT2G37430.1     LNLT-PL-ENDLEYIFGK-------TFVPKIDMKFVL
gm007347_Glyma0 LNLT-PF-ENDLKLLFGKM-APNSGALVDSL------
gm052410_Glyma1 LNLT-PL-ENDLKLLFGKM-APNAGAFA---------
pt028209_POPTR_ LSLALPMYQNDSELQLEKVDRPMLRCFI---------
                *.*: *: :** :  : *        :
BoxShade v3.31 C (beta, 970507) Output
AT2G37430.1     M K R E R S D F E E S L K N I D I A K C L M I L A Q T S M V K Q I G L N Q H T E S H - - - - - - - - - - - - - T S N Q F
gm007347_Glyma0    M K R Q R - D F - E G F E S I D L A N C L M M L S H P Q Q N K K L - L Q T K I E - - - - - - - - - - - - - - - - A V K F
gm052410_Glyma1    M K R Q R - D F - K G F E S I D L A N C L M M L S H P Q Q N E K L - L Q K K I E - - - - - - - - - - - - - - - - A V E F
pt028209_POPTR_    M K R D R - - - - E Q A E - I D L A K C L M L L S K V G Q A D H E I L T N Y R S A A A A A A A A T A G A G A G A G R S F
 
AT2G37430.1     E C K T C N K R F S S F Q A L G G H R A S H K K P K L T V E Q K D V K H - - - - - L S N D Y K G N H F H K C S I C S Q S
gm007347_Glyma0    E C K T C N R K F S S F Q A L G G H R A S H K R S K L E G D - E L K A H A I S L S L G N K P K - - - M H E C S I C G Q E
gm052410_Glyma1    E C K T C N R K F S S F Q A L G G H R A S H K R S K L E G D H E L K A H A I S L S L A N K P K - - - M H E C S I C G Q E
pt028209_POPTR_    S C K T C N K N F P S F Q A L G G H R A S H K K P K L K - - - E S T G N - - L L K L P N S P S K P K T H Q C S I C G L E
 
AT2G37430.1     F G T G Q A L G G H M R R H R S S M T V E P S F I S - - - - - - - - - - - - P M I P S M P V L K R C G S S K R I L S L D
gm007347_Glyma0    F S L G Q A L G G H M R R H R T T I N E D F S S I K - - - - - - - - - - - - Q V I T Q V P D L K R S N S T R V I M C L D
gm052410_Glyma1    F S L G Q A L G G H M R R H R T T I H E D F S S I K - - - - - - - - - - - - Q V I T Q M P V L K R S N S T R V V T C L D
pt028209_POPTR_    F P L G Q A L G G H M R R H R A P H N V D T T S T S S K D H E L A A V T Q P P F L P A V P V L K R S N S S K R V L C L D
 
AT2G37430.1     L N L T - P L - E N D L E Y I F G K - - - - - - - T F V P K I D M K F V L
gm007347_Glyma0    L N L T - P F - E N D L K L L F G K M - A P N S G A L V D S L - - - - - -
gm052410_Glyma1    L N L T - P L - E N D L K L L F G K M - A P N A G A F A - - - - - - - - -
pt028209_POPTR_    L S L A L P M Y Q N D S E L Q L E K V D R P M L R C F I - - - - - - - - -
 
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