fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G37430.1 SKRILSLDLNLTPLEN at 147/178 in AT2G37430.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt028209 SKRVLCLDLSLALPMY in 168/198 AT2G37430.1 1st_1st 0.361194029 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G37430.1     MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTS-------------NQF
pt028209_POPTR_ MKRDREQAE-----IDLAKCLMLLSKVGQADHEILTNYRSAAAAAAAATAGAGAGAGRSF
                ***:*.: *     **:*****:*::.. ..:  *.:: .: ::             ..*

AT2G37430.1     ECKTCNKRFSSFQALGGHRASHKKPKLTVEQKDVKHLSNDYKGNHFHKCSICSQSFGTGQ
pt028209_POPTR_ SCKTCNKNFPSFQALGGHRASHKKPKLKESTGNLLKLPNSPSKPKTHQCSICGLEFPLGQ
                .******.*.*****************. .  :: :*.*. .  : *:****. .*  **

AT2G37430.1     ALGGHMRRHRSSMTVEPSFIS------------PMIPSMPVLKRCGSSKRILSLDLNLT-
pt028209_POPTR_ ALGGHMRRHRAPHNVDTTSTSSKDHELAAVTQPPFLPAVPVLKRSNSSKRVLCLDLSLAL
                **********:. .*:.:  *            *::*::*****..****:*.***.*: 

AT2G37430.1     PL-ENDLEYIFGKTFVPKIDMKFVL
pt028209_POPTR_ PMYQNDSELQLEKVDRPMLRC-FI-
                *: :** *  : *.  * :   *:
BoxShade v3.31 C (beta, 970507) Output
AT2G37430.1     M K R E R S D F E E S L K N I D I A K C L M I L A Q T S M V K Q I G L N Q H T E S H T S - - - - - - - - - - - - - N Q F
pt028209_POPTR_    M K R D R E Q A E - - - - - I D L A K C L M L L S K V G Q A D H E I L T N Y R S A A A A A A A A T A G A G A G A G R S F
 
AT2G37430.1     E C K T C N K R F S S F Q A L G G H R A S H K K P K L T V E Q K D V K H L S N D Y K G N H F H K C S I C S Q S F G T G Q
pt028209_POPTR_    S C K T C N K N F P S F Q A L G G H R A S H K K P K L K E S T G N L L K L P N S P S K P K T H Q C S I C G L E F P L G Q
 
AT2G37430.1     A L G G H M R R H R S S M T V E P S F I S - - - - - - - - - - - - P M I P S M P V L K R C G S S K R I L S L D L N L T -
pt028209_POPTR_    A L G G H M R R H R A P H N V D T T S T S S K D H E L A A V T Q P P F L P A V P V L K R S N S S K R V L C L D L S L A L
 
AT2G37430.1     P L - E N D L E Y I F G K T F V P K I D M K F V L
pt028209_POPTR_    P M Y Q N D S E L Q L E K V D R P M L R C - F I -
 
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