Input
| Putative repression domain
|
|
AT2G37430.1 |
SKRILSLDLNLTPLEN at 147/178 in AT2G37430.1 |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Gm052410 |
TRVVTCLDLNLTPLEN in 144/171 |
AT2G37430.1 |
1st_1st |
0.426865671 |
Ia |
Gm007347 |
TRVIMCLDLNLTPFEN in 143/173 |
AT2G37430.1 |
not_1st |
0.426865671 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)
AT2G37430.1 MKRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQ
gm052410_Glyma1 MKRQR-DF-KGFESIDLANCLMMLSHPQQNEKL-LQKKIE---AVEFECKTCNRKFSSFQ
gm007347_Glyma0 MKRQR-DF-EGFESIDLANCLMMLSHPQQNKKL-LQTKIE---AVKFECKTCNRKFSSFQ
***:* ** :.::.**:*:***:*::.. ::: *: : * : :*******::*****
AT2G37430.1 ALGGHRASHKKPKLTVEQKDVKH-----LSNDYKGNHFHKCSICSQSFGTGQALGGHMRR
gm052410_Glyma1 ALGGHRASHKRSKLEGDHELKAHAISLSLANKPK---MHECSICGQEFSLGQALGGHMRR
gm007347_Glyma0 ALGGHRASHKRSKLEGD-ELKAHAISLSLGNKPK---MHECSICGQEFSLGQALGGHMRR
**********:.** : : * *.*. * :*:****.*.*. **********
AT2G37430.1 HRSSMTVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGK------TFV
gm052410_Glyma1 HRTTIHEDFSSIKQVITQMPVLKRSNSTRVVTCLDLNLTPLENDLKLLFGKMAPNAGAFA
gm007347_Glyma0 HRTTINEDFSSIKQVITQVPDLKRSNSTRVIMCLDLNLTPFENDLKLLFGKMAPNSGALV
**::: : * *. :*..:* ***..*:: : .*******:****: :*** ::.
AT2G37430.1 PKIDMKFVL
gm052410_Glyma1 ---------
gm007347_Glyma0 DSL------
BoxShade v3.31 C (beta, 970507) Output
AT2G37430.1 |
M |
K |
R |
E |
R |
S |
D |
F |
E |
E |
S |
L |
K |
N |
I |
D |
I |
A |
K |
C |
L |
M |
I |
L |
A |
Q |
T |
S |
M |
V |
K |
Q |
I |
G |
L |
N |
Q |
H |
T |
E |
S |
H |
T |
S |
N |
Q |
F |
E |
C |
K |
T |
C |
N |
K |
R |
F |
S |
S |
F |
Q |
gm052410_Glyma1 |
M |
K |
R |
Q |
R |
- |
D |
F |
- |
K |
G |
F |
E |
S |
I |
D |
L |
A |
N |
C |
L |
M |
M |
L |
S |
H |
P |
Q |
Q |
N |
E |
K |
L |
- |
L |
Q |
K |
K |
I |
E |
- |
- |
- |
A |
V |
E |
F |
E |
C |
K |
T |
C |
N |
R |
K |
F |
S |
S |
F |
Q |
gm007347_Glyma0 |
M |
K |
R |
Q |
R |
- |
D |
F |
- |
E |
G |
F |
E |
S |
I |
D |
L |
A |
N |
C |
L |
M |
M |
L |
S |
H |
P |
Q |
Q |
N |
K |
K |
L |
- |
L |
Q |
T |
K |
I |
E |
- |
- |
- |
A |
V |
K |
F |
E |
C |
K |
T |
C |
N |
R |
K |
F |
S |
S |
F |
Q |
|
AT2G37430.1 |
A |
L |
G |
G |
H |
R |
A |
S |
H |
K |
K |
P |
K |
L |
T |
V |
E |
Q |
K |
D |
V |
K |
H |
- |
- |
- |
- |
- |
L |
S |
N |
D |
Y |
K |
G |
N |
H |
F |
H |
K |
C |
S |
I |
C |
S |
Q |
S |
F |
G |
T |
G |
Q |
A |
L |
G |
G |
H |
M |
R |
R |
gm052410_Glyma1 |
A |
L |
G |
G |
H |
R |
A |
S |
H |
K |
R |
S |
K |
L |
E |
G |
D |
H |
E |
L |
K |
A |
H |
A |
I |
S |
L |
S |
L |
A |
N |
K |
P |
K |
- |
- |
- |
M |
H |
E |
C |
S |
I |
C |
G |
Q |
E |
F |
S |
L |
G |
Q |
A |
L |
G |
G |
H |
M |
R |
R |
gm007347_Glyma0 |
A |
L |
G |
G |
H |
R |
A |
S |
H |
K |
R |
S |
K |
L |
E |
G |
D |
- |
E |
L |
K |
A |
H |
A |
I |
S |
L |
S |
L |
G |
N |
K |
P |
K |
- |
- |
- |
M |
H |
E |
C |
S |
I |
C |
G |
Q |
E |
F |
S |
L |
G |
Q |
A |
L |
G |
G |
H |
M |
R |
R |
|
AT2G37430.1 |
H |
R |
S |
S |
M |
T |
V |
E |
P |
S |
F |
I |
S |
P |
M |
I |
P |
S |
M |
P |
V |
L |
K |
R |
C |
G |
S |
S |
K |
R |
I |
L |
S |
L |
D |
L |
N |
L |
T |
P |
L |
E |
N |
D |
L |
E |
Y |
I |
F |
G |
K |
- |
- |
- |
- |
- |
- |
T |
F |
V |
gm052410_Glyma1 |
H |
R |
T |
T |
I |
H |
E |
D |
F |
S |
S |
I |
K |
Q |
V |
I |
T |
Q |
M |
P |
V |
L |
K |
R |
S |
N |
S |
T |
R |
V |
V |
T |
C |
L |
D |
L |
N |
L |
T |
P |
L |
E |
N |
D |
L |
K |
L |
L |
F |
G |
K |
M |
A |
P |
N |
A |
G |
A |
F |
A |
gm007347_Glyma0 |
H |
R |
T |
T |
I |
N |
E |
D |
F |
S |
S |
I |
K |
Q |
V |
I |
T |
Q |
V |
P |
D |
L |
K |
R |
S |
N |
S |
T |
R |
V |
I |
M |
C |
L |
D |
L |
N |
L |
T |
P |
F |
E |
N |
D |
L |
K |
L |
L |
F |
G |
K |
M |
A |
P |
N |
S |
G |
A |
L |
V |
|
AT2G37430.1 |
P |
K |
I |
D |
M |
K |
F |
V |
L |
gm052410_Glyma1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
gm007347_Glyma0 |
D |
S |
L |
- |
- |
- |
- |
- |
- |
|
|