fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G37590.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt005909 not found in 326aa AT2G37590.1 1st_1st 0.339113680 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G37590.1     MVFSSIQAYLDSSNWQQAPPSNYNHDGTGASANGGHVLRPQLQPQQQPQQQPHPNGSGGG
pt005909_POPTR_ MDFSSIPAYLDPANWQQQP----NHQ-TGVSSSTA---TQHLPPPPPPPPQPH-------
                * **** ****.:**** *    **: **.*:. .     :* *   *  ***       

AT2G37590.1     GGGGGGSIRAGSMVDRARQANVALPEAALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCR
pt005909_POPTR_ GSGGAGSIRPGSMADRARMANIPLPEPALKCPRCESTNTKFCYFNNYSLTQPRHFCKTCR
                *.**.****.***.**** **:.***.*********************************

AT2G37590.1     RYWTRGGALRNVPVGGGCRRNRRTKSNSNNN------NNSTATSNNTSFSSGNASTISTI
pt005909_POPTR_ RYWTRGGALRSVPVGGGCRRNKRSKESSSKSPISGYRQTGSCSSSTVSSNSGTSDTFG--
                **********.**********:*:*..*.:.      :..:.:*...* .**.:.*:.  

AT2G37590.1     LSSHYGGNQESILSQILSPARLMNPTYNHLGDLTSNTKTDNNMSLLNYGGLSQDL-----
pt005909_POPTR_ ------------LGPQVPPMRFMAPLHHHTEFASGNIG-------LNYGALSKTLVGGAS
                            *.  :.* *:* * ::*    :.*         ****.**: *     

AT2G37590.1     -RSIHMGA------------SGGSLMSC--VDEWRSASYHQQSSMGGGNLEDSSNPNPSA
pt005909_POPTR_ DLNFQMGSALASAGLGGNGGAGGSLLSMGGFDQWRMQQGQQLPFLGG--------LDSSA
                  .::**:            :****:*   .*:**  . :* . :**         :.**

AT2G37590.1     NGFYSFESPRITSA----------SISSALASQFSSVKVEDN-----PYKWVNVNGN--C
pt005909_POPTR_ SGLYPFEGGAEPSGYGGGADHIRPKISSSTATPLASVKMEDNQELNMSRQFLGIPGNDQY
                .*:*.**.   .*.          .***: *: ::***:***     . :::.: **   

AT2G37590.1     SSWNDLS-AFGSSR
pt005909_POPTR_ PEWYFMDRSF----
                ..*  :. :*
BoxShade v3.31 C (beta, 970507) Output
AT2G37590.1     M V F S S I Q A Y L D S S N W Q Q A P P S N Y N H D G T G A S A N G G H V L R P Q L Q P Q Q Q P Q Q Q P H P N G S G G G
pt005909_POPTR_    M D F S S I P A Y L D P A N W Q Q Q P - - - - N H Q - T G V S S S T A - - - T Q H L P P P P P P P P Q P H - - - - - - -
 
AT2G37590.1     G G G G G G S I R A G S M V D R A R Q A N V A L P E A A L K C P R C E S T N T K F C Y F N N Y S L T Q P R H F C K T C R
pt005909_POPTR_    G S G G A G S I R P G S M A D R A R M A N I P L P E P A L K C P R C E S T N T K F C Y F N N Y S L T Q P R H F C K T C R
 
AT2G37590.1     R Y W T R G G A L R N V P V G G G C R R N R R T K S N S N N N - - - - - - N N S T A T S N N T S F S S G N A S T I S T I
pt005909_POPTR_    R Y W T R G G A L R S V P V G G G C R R N K R S K E S S S K S P I S G Y R Q T G S C S S S T V S S N S G T S D T F G - -
 
AT2G37590.1     L S S H Y G G N Q E S I L S Q I L S P A R L M N P T Y N H L G D L T S N T K T D N N M S L L N Y G G L S Q D L - - - - -
pt005909_POPTR_    - - - - - - - - - - - - L G P Q V P P M R F M A P L H H H T E F A S G N I G - - - - - - - L N Y G A L S K T L V G G A S
 
AT2G37590.1     - R S I H M G A - - - - - - - - - - - - S G G S L M S C - - V D E W R S A S Y H Q Q S S M G G G N L E D S S N P N P S A
pt005909_POPTR_    D L N F Q M G S A L A S A G L G G N G G A G G S L L S M G G F D Q W R M Q Q G Q Q L P F L G G - - - - - - - - L D S S A
 
AT2G37590.1     N G F Y S F E S P R I T S A - - - - - - - - - - S I S S A L A S Q F S S V K V E D N - - - - - P Y K W V N V N G N - - C
pt005909_POPTR_    S G L Y P F E G G A E P S G Y G G G A D H I R P K I S S S T A T P L A S V K M E D N Q E L N M S R Q F L G I P G N D Q Y
 
AT2G37590.1     S S W N D L S - A F G S S R
pt005909_POPTR_    P E W Y F M D R S F - - - -
 
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