fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G37740.1 GDRFEDLDLELRLGTD at 288/304 in AT2G37740.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp016100 PLDSVDLELRLGQRYD in 207/217 AT2G37740.1 1st_1st 0.165137614 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G37740.1     ----------------------MEKP--GGFW--------------------IPKKSNKE
pp016100_Pp1s2_ MGTHMVLFPEHEHVRRSTSWGGMHDSDGGGSWGTPSSYGTHTQGGGNTWSKRIAANSAES
                                      *...  ** *                    *. :* :.

AT2G37740.1     SSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYL
pp016100_Pp1s2_ DSWEVRAFAEDASTSGQWPPRSYSCSFCQREFRTAQALGGHMNVHRRERAQANQ------
                .***  ***** ::.. ******:****:***::*************:**: :*      

AT2G37740.1     FPKSSSSPEYPSHKDSDNIHETSCYTLVFNTKPNYFKTQHSCVIDLSSSSSLPYLTPSRV
pp016100_Pp1s2_ ------------------------------------------LAQLRSGA----------
                                                          : :* *.:          

AT2G37740.1     SSGLPGKQHTSSSPPSFVVEPSKNSKYIPSSSPWSCPSTVVEQKSCDLYEIPAMEGEKKR
pp016100_Pp1s2_ SSG-------SETP---------NSTFNNASSDW--------------------------
                ***       *.:*         **.:  :** *                          

AT2G37740.1     KTESDVPKIGHKAKLSLGNTTDLSVSMNLVIHQSFPITAHGSDEEIGRVDIRKRRRRHES
pp016100_Pp1s2_ --------------IARGNSHDMQ-----------------SSSDYGRAS------SYEY
                              :: **: *:.                 *..: **..       :* 

AT2G37740.1     P-----SQQSIFISSLSCKSDIITRNE-----ESKHKGDR-FEDLDLELRLGT--DPPKG
pp016100_Pp1s2_ PHAHVDSYQSYGGSSSSYRNPILFNSPCESTWRSPH--DKPLDSVDLELRLGQRYD----
                *     * **   ** * :. *: ..      .* *  *: ::.:*******   *    

AT2G37740.1     I
pp016100_Pp1s2_ -
BoxShade v3.31 C (beta, 970507) Output
AT2G37740.1     - - - - - - - - - - - - - - - - - - - - - - M E K P - - G G F W - - - - - - - - - - - - - - - - - - - - I P K K S N K E
pp016100_Pp1s2_    M G T H M V L F P E H E H V R R S T S W G G M H D S D G G G S W G T P S S Y G T H T Q G G G N T W S K R I A A N S A E S
 
AT2G37740.1     S S W E E L A F A E D D A A G S L W P P R S Y T C S F C R R E F K S A Q A L G G H M N V H R R D R A R L K Q A D D Q Y L
pp016100_Pp1s2_    D S W E V R A F A E D A S T S G Q W P P R S Y S C S F C Q R E F R T A Q A L G G H M N V H R R E R A Q A N Q - - - - - -
 
AT2G37740.1     F P K S S S S P E Y P S H K D S D N I H E T S C Y T L V F N T K P N Y F K T Q H S C V I D L S S S S S L P Y L T P S R V
pp016100_Pp1s2_    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - L A Q L R S G A - - - - - - - - - -
 
AT2G37740.1     S S G L P G K Q H T S S S P P S F V V E P S K N S K Y I P S S S P W S C P S T V V E Q K S C D L Y E I P A M E G E K K R
pp016100_Pp1s2_    S S G - - - - - - - S E T P - - - - - - - - - N S T F N N A S S D W - - - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G37740.1     K T E S D V P K I G H K A K L S L G N T T D L S V S M N L V I H Q S F P I T A H G S D E E I G R V D I R K R R R R H E S
pp016100_Pp1s2_    - - - - - - - - - - - - - - I A R G N S H D M Q - - - - - - - - - - - - - - - - - S S S D Y G R A S - - - - - - S Y E Y
 
AT2G37740.1     P - - - - - S Q Q S I F I S S L S C K S D I I T R N E - - - - - E S K H K G D R - F E D L D L E L R L G T - - D P P K G
pp016100_Pp1s2_    P H A H V D S Y Q S Y G G S S S S Y R N P I L F N S P C E S T W R S P H - - D K P L D S V D L E L R L G Q R Y D - - - -
 
AT2G37740.1     I
pp016100_Pp1s2_    -
 
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