fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G37740.1 GDRFEDLDLELRLGTD at 288/304 in AT2G37740.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb004438 RQEEVDLELRLGTS in 317/325 AT2G37740.1 1st_1st 0.187155963 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G37740.1     ----------MEK------------PGGF-----------WIPK----KSNKESSWEELA
Sb004438_Sorbi1 MNSTNSAVEQMAKYYWGMLGAARTTTGGAGAATSSLIRSSWPPPAAHGRSGGEPSWEELA
                          * *            .**            * *     :*. *.******

AT2G37740.1     FAEDDA---AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYLFPKS
Sb004438_Sorbi1 FARDAAGQLGGCVWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLRQC---------
                **.* *   .*.:********:******:*******************:*.         

AT2G37740.1     SSSPEYPSHKDSDNIHETSCYTLVFNTKPNYFKTQHSCVIDLSSSSSLPYLTPSRVSSGL
Sb004438_Sorbi1 -ASPSSPPDHDQEPIAAPL---------PTPELADHHQLLQLQGSPLFRTTKAAVLISGR
                 :**. *..:*.: *  .          *.   ::*  :::*..*. :   ..: : ** 

AT2G37740.1     PGKQH------TSSSPPSFVVEPSKNSKYIPSSSPWSCPSTVV-EQKSCDLYEIPAMEGE
Sb004438_Sorbi1 PACDHHHQNYYNDNREEEEEEEEEEEEAVITTTCPRYISTTIIKESKSKVVISIPASTAA
                *. :*      ...   .   * .::.  *.::.*   .:*:: *.**  : .***  . 

AT2G37740.1     KKRKTESDVPKIGHKAKLSLGNTTDLSVSMNLVIHQSFPITAHGSDEEIGRVDIRKRRRR
Sb004438_Sorbi1 AGSIKETAIAIIGEEEE--------------------------EEEEEIMLAGRRKRRRL
                    .*: :. **.: :                           .:***  .. ***** 

AT2G37740.1     HESPSQQSI---------FISSLSCKSDI----------ITRNEESK-----HKGDRFED
Sb004438_Sorbi1 VSQPPEPAFTSPPFYDLRLVAASSPKGGVEHDAKVPNNKVTSTSPSSLSPLHHLAGRQEE
                 ..*.: ::         :::: * *..:          :* .. *.     * ..* *:

AT2G37740.1     LDLELRLGTDPPKGI
Sb004438_Sorbi1 VDLELRLGTS-----
                :********.
BoxShade v3.31 C (beta, 970507) Output
AT2G37740.1     - - - - - - - - - - M E K - - - - - - - - - - - - P G G F - - - - - - - - - - - W I P K - - - - K S N K E S S W E E L A
Sb004438_Sorbi1    M N S T N S A V E Q M A K Y Y W G M L G A A R T T T G G A G A A T S S L I R S S W P P P A A H G R S G G E P S W E E L A
 
AT2G37740.1     F A E D D A - - - A G S L W P P R S Y T C S F C R R E F K S A Q A L G G H M N V H R R D R A R L K Q A D D Q Y L F P K S
Sb004438_Sorbi1    F A R D A A G Q L G G C V W P P R S Y T C T F C R R E F R S A Q A L G G H M N V H R R D R A R L R Q C - - - - - - - - -
 
AT2G37740.1     S S S P E Y P S H K D S D N I H E T S C Y T L V F N T K P N Y F K T Q H S C V I D L S S S S S L P Y L T P S R V S S G L
Sb004438_Sorbi1    - A S P S S P P D H D Q E P I A A P L - - - - - - - - - P T P E L A D H H Q L L Q L Q G S P L F R T T K A A V L I S G R
 
AT2G37740.1     P G K Q H - - - - - - T S S S P P S F V V E P S K N S K Y I P S S S P W S C P S T V V - E Q K S C D L Y E I P A M E G E
Sb004438_Sorbi1    P A C D H H H Q N Y Y N D N R E E E E E E E E E E E E A V I T T T C P R Y I S T T I I K E S K S K V V I S I P A S T A A
 
AT2G37740.1     K K R K T E S D V P K I G H K A K L S L G N T T D L S V S M N L V I H Q S F P I T A H G S D E E I G R V D I R K R R R R
Sb004438_Sorbi1    A G S I K E T A I A I I G E E E E - - - - - - - - - - - - - - - - - - - - - - - - - - E E E E E I M L A G R R K R R R L
 
AT2G37740.1     H E S P S Q Q S I - - - - - - - - - F I S S L S C K S D I - - - - - - - - - - I T R N E E S K - - - - - H K G D R F E D
Sb004438_Sorbi1    V S Q P P E P A F T S P P F Y D L R L V A A S S P K G G V E H D A K V P N N K V T S T S P S S L S P L H H L A G R Q E E
 
AT2G37740.1     L D L E L R L G T D P P K G I
Sb004438_Sorbi1    V D L E L R L G T S - - - - -
 
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