fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G38090.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt020982 not found in 308aa AT5G58900.1 not_not 0.541015625 III
Pt041952 not found in 292aa AT5G05790.1 not_not 0.427734375 III
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G38090.1     MNRGIEVMSPATYLETSNWLFQE----NRGTKWTAEENKKFENALAFYDKDTPDRWSRVA
pt020982_POPTR_ MKWETEILSPGSYLSSSNWLAEE----SKNTKWTIAENKAFENALAIYDKETSDRWHKVA
pt041952_POPTR_ ----METL-------YSSWSMSNPICVAQTTEWTKEENKMFERALAIFDEHEPDRWLKVA
                     * :        *.*  .:     : *:**  *** **.***::*:. .*** :**

AT2G38090.1     AMLPGKTVGDVIKQYRELEEDVSDIEAGLIPIPGYASDSFTLDWGGYDGASGNNGFNMNG
pt020982_POPTR_ AMIPGKTVEDVIKQYKELELDVSYIEAGLIPVPGYSSSPFTLDW------VNGNGYGYDG
pt041952_POPTR_ AMIPGKTVNDVIKQYKKLEEDVCDIEAGRVPVPGYLSSSFTSEL------VDNSTF--DA
                **:***** ******::** **. **** :*:*** *..** :        ... :  :.

AT2G38090.1     YYFS-AAGGKRGSAARTAEHERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRT
pt020982_POPTR_ FKQSYGLGGKRSSTGRPTDQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVISRT
pt041952_POPTR_ YR-------KRPLNIKSADQQRKKGVPWTEEEHRRFLMGLLKHGKGDWRNISRNFVGSKT
                :        **    :.::::************: ***** *:********:**** ::*

AT2G38090.1     PTQVASHAQKYFIR-QVNGGKDKRRSSIHDITTVNI-------PD----SPDAAAADNAT
pt020982_POPTR_ PTQVASHAQKYFIR-QLSGGKDKRRASIHDITTVNLNETRTPSPDNKRTSPDQSGAISQQ
pt041952_POPTR_ PTQVASHAQKYFIRQQLSGVKDKRRPSIHDITTLNLAGSTSPSDGDKASSLDQSDVLLPQ
                ************** *:.* *****.*******:*:        .    * * : .    

AT2G38090.1     ANAPCSPPSVGGNQRETSEW----EGQTL-YDETAAAFYNQNAFSETLLGMSSTPYMAKL
pt020982_POPTR_ PNSAAMP-------RTHFQWNQPNSGATMAFNST-----NANMFMSSPYGINS--YGLKM
pt041952_POPTR_ QKPAGMQ-------KLLIDWDESKDGSVMTFGST-----HGDLFESSPYEISS--NGLTF
                 :..          :   :*    .* .: :..*     : : * .:   :.*     .:

AT2G38090.1     QEQSFLNASQFESYNAYLQM-------------
pt020982_POPTR_ QGQNPHRGAVHDSYIGQQTMGFQMQSAQHYPHG
pt041952_POPTR_ QGQNLYAGARHGARIKPRNLVFQLSPPRFQIH-
                * *.   .: . :      :
BoxShade v3.31 C (beta, 970507) Output
AT2G38090.1     M N R G I E V M S P A T Y L E T S N W L F Q E - - - - N R G T K W T A E E N K K F E N A L A F Y D K D T P D R W S R V A
pt020982_POPTR_    M K W E T E I L S P G S Y L S S S N W L A E E - - - - S K N T K W T I A E N K A F E N A L A I Y D K E T S D R W H K V A
pt041952_POPTR_    - - - - M E T L - - - - - - - Y S S W S M S N P I C V A Q T T E W T K E E N K M F E R A L A I F D E H E P D R W L K V A
 
AT2G38090.1     A M L P G K T V G D V I K Q Y R E L E E D V S D I E A G L I P I P G Y A S D S F T L D W G G Y D G A S G N N G F N M N G
pt020982_POPTR_    A M I P G K T V E D V I K Q Y K E L E L D V S Y I E A G L I P V P G Y S S S P F T L D W - - - - - - V N G N G Y G Y D G
pt041952_POPTR_    A M I P G K T V N D V I K Q Y K K L E E D V C D I E A G R V P V P G Y L S S S F T S E L - - - - - - V D N S T F - - D A
 
AT2G38090.1     Y Y F S - A A G G K R G S A A R T A E H E R K K G V P W T E E E H R Q F L M G L K K Y G K G D W R N I A R N F V T T R T
pt020982_POPTR_    F K Q S Y G L G G K R S S T G R P T D Q E R K K G V P W T E E E H K L F L M G L K K Y G K G D W R N I S R N F V I S R T
pt041952_POPTR_    Y R - - - - - - - K R P L N I K S A D Q Q R K K G V P W T E E E H R R F L M G L L K H G K G D W R N I S R N F V G S K T
 
AT2G38090.1     P T Q V A S H A Q K Y F I R - Q V N G G K D K R R S S I H D I T T V N I - - - - - - - P D - - - - S P D A A A A D N A T
pt020982_POPTR_    P T Q V A S H A Q K Y F I R - Q L S G G K D K R R A S I H D I T T V N L N E T R T P S P D N K R T S P D Q S G A I S Q Q
pt041952_POPTR_    P T Q V A S H A Q K Y F I R Q Q L S G V K D K R R P S I H D I T T L N L A G S T S P S D G D K A S S L D Q S D V L L P Q
 
AT2G38090.1     A N A P C S P P S V G G N Q R E T S E W - - - - E G Q T L - Y D E T A A A F Y N Q N A F S E T L L G M S S T P Y M A K L
pt020982_POPTR_    P N S A A M P - - - - - - - R T H F Q W N Q P N S G A T M A F N S T - - - - - N A N M F M S S P Y G I N S - - Y G L K M
pt041952_POPTR_    Q K P A G M Q - - - - - - - K L L I D W D E S K D G S V M T F G S T - - - - - H G D L F E S S P Y E I S S - - N G L T F
 
AT2G38090.1     Q E Q S F L N A S Q F E S Y N A Y L Q M - - - - - - - - - - - - -
pt020982_POPTR_    Q G Q N P H R G A V H D S Y I G Q Q T M G F Q M Q S A Q H Y P H G
pt041952_POPTR_    Q G Q N L Y A G A R H G A R I K P R N L V F Q L S P P R F Q I H -
 
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