fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G38250.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp003429 not found in 310aa AT2G38250.1 1st_1st 0.393650793 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G38250.1     MDGHQHHHLHQLQY--------LNKHHLHTQSQTPEIASPVAV-----------------
pp003429_Pp1s28 -----------MAYAMRPPQTGLMGDHLTIMTSVPNIA-PLATMQSASDMAGESVVTPDG
                           : *        *  .**   :..*:** *:*.                 

AT2G38250.1     ------GDRFPQWSVEETKELIGIRGELDQTFMETKRNKLLWEVISNKMRDKSFPRSPEQ
pp003429_Pp1s28 RRGVKKEDRIPQWGYHETKEFIAIRAELEKDFTQTKRNKTLWELISGKMKEKSYRRSADQ
                       **:***. .****:*.**.**:: * :***** ***:**.**::**: **.:*

AT2G38250.1     CKCKWKNLVTRFKGCETMEAETARQQFPFYDDMQNIFTTRMQRM--LWAESEGGGGGTSG
pp003429_Pp1s28 CKCKWKNLVNRYKGKETSEPDNGR-QCPFFEELHTIFVERAKNMDRLLLESEPGSRPKKK
                *********.*:** ** *.:..* * **:::::.**. * :.*  *  *** *.  .. 

AT2G38250.1     AARKREYSSDEEEENVNEELVDVSNDPKILNPKKNIA-KKRKGGSNSSNSNNGVREVLEE
pp003429_Pp1s28 VKRGELKLSDEDTEE-EEENKDDDEDERLQRRKKRKSDKERQRVTADKYRANSMQEVLED
                . * .   ***: *: :**  * .:* :: . **. : *:*:  : ..   *.::****:

AT2G38250.1     FMRHQVRMESEWREGWEAREKERAEKEEEWRRKMEELEKERLAMERMWRDREEQRRSREE
pp003429_Pp1s28 FFQQQLKAEAMWRDILDSREMDRRLKEREWQKNMEFLEHDRIAREHAWREREDEWREREE
                *:::*:: *: **:  ::** :*  **.**:::** **::*:* *: **:**:: *.***

AT2G38250.1     MRAEKRDSLINALLAKLT-RDGSL
pp003429_Pp1s28 LRAEKQDEIFAQLFTKYAQRNASR
                :****:*.::  *::* : *:.*
BoxShade v3.31 C (beta, 970507) Output
AT2G38250.1     M D G H Q H H H L H Q L Q Y - - - - - - - - L N K H H L H T Q S Q T P E I A S P V A V - - - - - - - - - - - - - - - - -
pp003429_Pp1s28    - - - - - - - - - - - M A Y A M R P P Q T G L M G D H L T I M T S V P N I A - P L A T M Q S A S D M A G E S V V T P D G
 
AT2G38250.1     - - - - - - G D R F P Q W S V E E T K E L I G I R G E L D Q T F M E T K R N K L L W E V I S N K M R D K S F P R S P E Q
pp003429_Pp1s28    R R G V K K E D R I P Q W G Y H E T K E F I A I R A E L E K D F T Q T K R N K T L W E L I S G K M K E K S Y R R S A D Q
 
AT2G38250.1     C K C K W K N L V T R F K G C E T M E A E T A R Q Q F P F Y D D M Q N I F T T R M Q R M - - L W A E S E G G G G G T S G
pp003429_Pp1s28    C K C K W K N L V N R Y K G K E T S E P D N G R - Q C P F F E E L H T I F V E R A K N M D R L L L E S E P G S R P K K K
 
AT2G38250.1     A A R K R E Y S S D E E E E N V N E E L V D V S N D P K I L N P K K N I A - K K R K G G S N S S N S N N G V R E V L E E
pp003429_Pp1s28    V K R G E L K L S D E D T E E - E E E N K D D D E D E R L Q R R K K R K S D K E R Q R V T A D K Y R A N S M Q E V L E D
 
AT2G38250.1     F M R H Q V R M E S E W R E G W E A R E K E R A E K E E E W R R K M E E L E K E R L A M E R M W R D R E E Q R R S R E E
pp003429_Pp1s28    F F Q Q Q L K A E A M W R D I L D S R E M D R R L K E R E W Q K N M E F L E H D R I A R E H A W R E R E D E W R E R E E
 
AT2G38250.1     M R A E K R D S L I N A L L A K L T - R D G S L
pp003429_Pp1s28    L R A E K Q D E I F A Q L F T K Y A Q R N A S R
 
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