Input
| Putative repression domain
|
|
AT2G38300.1 |
ASRSIDLDLSLKLRQP at 273/340 in AT2G38300.1 |
|
TTTDQTLSLSLCPGSS at 301/340 in AT2G38300.1 |
IGQESTLDLTL at 334/340 in AT2G38300.1 |
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt043535 |
KASDCNLDLDLSLKLT in 310/378 |
AT2G38300.1 |
1st_1st |
0.334920634 |
Ib |
TKVNSELSLSLYSPSS in 341/378 |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G38300.1 MIPSME-----GGGKTN---REEEE----EEEEEEEEGEESKVSSNSTVEESDKKTKVRP
pt043535_POPTR_ ----MEESNHTGCSKTSASLQDHDESAGGENDEEESRPKKGGSSSNSTVEESENKSSVRP
** * .**. ::.:* *::***.. ::. *********::*:.***
AT2G38300.1 YVRSKVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHVKSHLQMYRS
pt043535_POPTR_ YVRSKLPRLRWTPELHLCFIKAVERLGGQERATPKLVLQLMNVNGLSIAHVKSHLQMYRS
*****:*******:*** *::**************** *:**::****************
AT2G38300.1 KKIDDQGQAIAGHKHLFETSTDRNIYKLSQLPMFRGYN--HNHDSPFRYGSKISNASLWN
pt043535_POPTR_ KKVDDPSQGMADHRHLVE-SGDRNIYNLSQLPMLQGYNQYQRQNSSFRYG----DAS-WN
**:** .*.:*.*:**.* * *****:******::*** :.::*.**** :** **
AT2G38300.1 SSSQ-----GTERSLIDQIRPGLIRNASVSNNIRG----SDYWTNNKSFQNIYSSSIS--
pt043535_POPTR_ AREHFIYNPHVGRCVIDRTRPG--SYGTVAERIYGSSNNSNWSANSGKFQMGASSLIAQS
: .: . *.:**: *** .:*::.* * *:: :*. .** ** *:
AT2G38300.1 ----------NHFPKLRHDHH----ERTNSVTFNSI----------QGHSRTFQKFHNGV
pt043535_POPTR_ KWKNEELKGDQQLPQSLHNNRFWQPQPSPSLDVSPLVLPQMQTKVGESSSTHFKRFLPSD
:::*: *::: : : *: ...: :. * *::* .
AT2G38300.1 EENTNHSYCSKTNGKRDASR-SIDLDLSLKLRQPEKT------ILEETETAATTTDQTLS
pt043535_POPTR_ SKSTTSTVQEWKTLKRKASDCNLDLDLSLKL-TPTKDHDSNQRSLEDS----TKVNSELS
.:.*. : . .. **.** .:******** * * **:: *..:. **
AT2G38300.1 LSLCPGSSSWKKSRLMKDEEDRTVKIGQESTLDLTL
pt043535_POPTR_ LSLYSPSSS-KLSRLKREGDGNKDHGKRASTLDLTI
*** . *** * *** :: :... : : ******:
BoxShade v3.31 C (beta, 970507) Output
AT2G38300.1 |
M |
I |
P |
S |
M |
E |
- |
- |
- |
- |
- |
G |
G |
G |
K |
T |
N |
- |
- |
- |
R |
E |
E |
E |
E |
- |
- |
- |
- |
E |
E |
E |
E |
E |
E |
E |
E |
G |
E |
E |
S |
K |
V |
S |
S |
N |
S |
T |
V |
E |
E |
S |
D |
K |
K |
T |
K |
V |
R |
P |
pt043535_POPTR_ |
- |
- |
- |
- |
M |
E |
E |
S |
N |
H |
T |
G |
C |
S |
K |
T |
S |
A |
S |
L |
Q |
D |
H |
D |
E |
S |
A |
G |
G |
E |
N |
D |
E |
E |
E |
S |
R |
P |
K |
K |
G |
G |
S |
S |
S |
N |
S |
T |
V |
E |
E |
S |
E |
N |
K |
S |
S |
V |
R |
P |
|
AT2G38300.1 |
Y |
V |
R |
S |
K |
V |
P |
R |
L |
R |
W |
T |
P |
D |
L |
H |
L |
R |
F |
V |
R |
A |
V |
E |
R |
L |
G |
G |
Q |
E |
R |
A |
T |
P |
K |
L |
V |
R |
Q |
M |
M |
N |
I |
K |
G |
L |
S |
I |
A |
H |
V |
K |
S |
H |
L |
Q |
M |
Y |
R |
S |
pt043535_POPTR_ |
Y |
V |
R |
S |
K |
L |
P |
R |
L |
R |
W |
T |
P |
E |
L |
H |
L |
C |
F |
I |
K |
A |
V |
E |
R |
L |
G |
G |
Q |
E |
R |
A |
T |
P |
K |
L |
V |
L |
Q |
L |
M |
N |
V |
N |
G |
L |
S |
I |
A |
H |
V |
K |
S |
H |
L |
Q |
M |
Y |
R |
S |
|
AT2G38300.1 |
K |
K |
I |
D |
D |
Q |
G |
Q |
A |
I |
A |
G |
H |
K |
H |
L |
F |
E |
T |
S |
T |
D |
R |
N |
I |
Y |
K |
L |
S |
Q |
L |
P |
M |
F |
R |
G |
Y |
N |
- |
- |
H |
N |
H |
D |
S |
P |
F |
R |
Y |
G |
S |
K |
I |
S |
N |
A |
S |
L |
W |
N |
pt043535_POPTR_ |
K |
K |
V |
D |
D |
P |
S |
Q |
G |
M |
A |
D |
H |
R |
H |
L |
V |
E |
- |
S |
G |
D |
R |
N |
I |
Y |
N |
L |
S |
Q |
L |
P |
M |
L |
Q |
G |
Y |
N |
Q |
Y |
Q |
R |
Q |
N |
S |
S |
F |
R |
Y |
G |
- |
- |
- |
- |
D |
A |
S |
- |
W |
N |
|
AT2G38300.1 |
S |
S |
S |
Q |
- |
- |
- |
- |
- |
G |
T |
E |
R |
S |
L |
I |
D |
Q |
I |
R |
P |
G |
L |
I |
R |
N |
A |
S |
V |
S |
N |
N |
I |
R |
G |
- |
- |
- |
- |
S |
D |
Y |
W |
T |
N |
N |
K |
S |
F |
Q |
N |
I |
Y |
S |
S |
S |
I |
S |
- |
- |
pt043535_POPTR_ |
A |
R |
E |
H |
F |
I |
Y |
N |
P |
H |
V |
G |
R |
C |
V |
I |
D |
R |
T |
R |
P |
G |
- |
- |
S |
Y |
G |
T |
V |
A |
E |
R |
I |
Y |
G |
S |
S |
N |
N |
S |
N |
W |
S |
A |
N |
S |
G |
K |
F |
Q |
M |
G |
A |
S |
S |
L |
I |
A |
Q |
S |
|
AT2G38300.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
H |
F |
P |
K |
L |
R |
H |
D |
H |
H |
- |
- |
- |
- |
E |
R |
T |
N |
S |
V |
T |
F |
N |
S |
I |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
Q |
G |
H |
S |
R |
T |
F |
Q |
K |
F |
H |
N |
G |
V |
pt043535_POPTR_ |
K |
W |
K |
N |
E |
E |
L |
K |
G |
D |
Q |
Q |
L |
P |
Q |
S |
L |
H |
N |
N |
R |
F |
W |
Q |
P |
Q |
P |
S |
P |
S |
L |
D |
V |
S |
P |
L |
V |
L |
P |
Q |
M |
Q |
T |
K |
V |
G |
E |
S |
S |
S |
T |
H |
F |
K |
R |
F |
L |
P |
S |
D |
|
AT2G38300.1 |
E |
E |
N |
T |
N |
H |
S |
Y |
C |
S |
K |
T |
N |
G |
K |
R |
D |
A |
S |
R |
- |
S |
I |
D |
L |
D |
L |
S |
L |
K |
L |
R |
Q |
P |
E |
K |
T |
- |
- |
- |
- |
- |
- |
I |
L |
E |
E |
T |
E |
T |
A |
A |
T |
T |
T |
D |
Q |
T |
L |
S |
pt043535_POPTR_ |
S |
K |
S |
T |
T |
S |
T |
V |
Q |
E |
W |
K |
T |
L |
K |
R |
K |
A |
S |
D |
C |
N |
L |
D |
L |
D |
L |
S |
L |
K |
L |
- |
T |
P |
T |
K |
D |
H |
D |
S |
N |
Q |
R |
S |
L |
E |
D |
S |
- |
- |
- |
- |
T |
K |
V |
N |
S |
E |
L |
S |
|
AT2G38300.1 |
L |
S |
L |
C |
P |
G |
S |
S |
S |
W |
K |
K |
S |
R |
L |
M |
K |
D |
E |
E |
D |
R |
T |
V |
K |
I |
G |
Q |
E |
S |
T |
L |
D |
L |
T |
L |
pt043535_POPTR_ |
L |
S |
L |
Y |
S |
P |
S |
S |
S |
- |
K |
L |
S |
R |
L |
K |
R |
E |
G |
D |
G |
N |
K |
D |
H |
G |
K |
R |
A |
S |
T |
L |
D |
L |
T |
I |
|
|