fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G38300.1 ASRSIDLDLSLKLRQP at 273/340 in AT2G38300.1
TTTDQTLSLSLCPGSS at 301/340 in AT2G38300.1
IGQESTLDLTL at 334/340 in AT2G38300.1
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os037264 QEGPLNLDLSLDICPR in 269/321 AT2G38300.1 1st_1st 0.214285714 Ib
ESCATGLSLSLF in 315/321
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G38300.1     MIPSMEGGGKTNREEEEEE---------------------EEEEEEGEESKVSSNSTVEE
Os037264_Os11t0 -------MGSAGKEEEEEDGGGGAPAAAANNYGSSTTSSTTEEEGSGESRRRTSSS----
                        *.:.:*****:                      *** .**. : :*.*    

AT2G38300.1     SDKKTKVRPYVRSKVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMNIKGLSIAHV
Os037264_Os11t0 ----SSVRPYVRSKNPRLRWTPELHLSFVRAVDRLGGQDRATPKLVLQLMNVRGLSIGHV
                    :.******** *******:*** *****:*****:******* *:**::****.**

AT2G38300.1     KSHLQMYRSKKIDDQGQAIAG-------HKHLFETSTDRNIYKLSQLPM-----------
Os037264_Os11t0 KSHLQMYRSKKIDESGQVIGGESWRSDDHLQMQGGGHGGQAYNLGHLSLPALHHRSITAG
                *************:.**.*.*       * ::   . . : *:*.:*.:           

AT2G38300.1     ----FRGYNHNHDSPFRYGSKISNASLWNSSSQGTERSLIDQIRPGLIRNASVSNNIRGS
Os037264_Os11t0 SGTIFQSRFGNSWSPWR-----CHGSYWLPAGH----HLLVGSKPYYPPAAEAEAPFRRS
                    *:.   *  **:*     .:.* * .:.:     *:   :*     *...  :* *

AT2G38300.1     DYWTNNKSFQNIYSSSISNHFPKLRHDHHERTNSVTFNSIQGHSRTFQKFHNGVEENTNH
Os037264_Os11t0 -------SARYVARANTSNH-P----DFVQGSSSSPDDNIMNHQRPVLK----------E
                       * : :  :. *** *    *. : :.* . :.* .*.*.. *          .

AT2G38300.1     SYCSKTNGKRDASRSIDLDLSLKLRQPEKTILEETETAATTTDQTLSLSLCPGSS-----
Os037264_Os11t0 MICSEGSNHQEGPLNLD----------------------------LSLDICPRGEKRKRE
                  **: ..:::.. .:*                            ***.:** ..     

AT2G38300.1     -SWKKSRLMKDEEDRTVKIG--QEST-----LDLTL-
Os037264_Os11t0 CSWRKQE--EDHDHATVAIGADQEAESCATGLSLSLF
                 **:*..  :*.:. ** **  **:      *.*:*
BoxShade v3.31 C (beta, 970507) Output
AT2G38300.1     M I P S M E G G G K T N R E E E E E E - - - - - - - - - - - - - - - - - - - - - E E E E E E G E E S K V S S N S T V E E
Os037264_Os11t0    - - - - - - - M G S A G K E E E E E D G G G G A P A A A A N N Y G S S T T S S T T E E E G S G E S R R R T S S S - - - -
 
AT2G38300.1     S D K K T K V R P Y V R S K V P R L R W T P D L H L R F V R A V E R L G G Q E R A T P K L V R Q M M N I K G L S I A H V
Os037264_Os11t0    - - - - S S V R P Y V R S K N P R L R W T P E L H L S F V R A V D R L G G Q D R A T P K L V L Q L M N V R G L S I G H V
 
AT2G38300.1     K S H L Q M Y R S K K I D D Q G Q A I A G - - - - - - - H K H L F E T S T D R N I Y K L S Q L P M - - - - - - - - - - -
Os037264_Os11t0    K S H L Q M Y R S K K I D E S G Q V I G G E S W R S D D H L Q M Q G G G H G G Q A Y N L G H L S L P A L H H R S I T A G
 
AT2G38300.1     - - - - F R G Y N H N H D S P F R Y G S K I S N A S L W N S S S Q G T E R S L I D Q I R P G L I R N A S V S N N I R G S
Os037264_Os11t0    S G T I F Q S R F G N S W S P W R - - - - - C H G S Y W L P A G H - - - - H L L V G S K P Y Y P P A A E A E A P F R R S
 
AT2G38300.1     D Y W T N N K S F Q N I Y S S S I S N H F P K L R H D H H E R T N S V T F N S I Q G H S R T F Q K F H N G V E E N T N H
Os037264_Os11t0    - - - - - - - S A R Y V A R A N T S N H - P - - - - D F V Q G S S S S P D D N I M N H Q R P V L K - - - - - - - - - - E
 
AT2G38300.1     S Y C S K T N G K R D A S R S I D L D L S L K L R Q P E K T I L E E T E T A A T T T D Q T L S L S L C P G S S - - - - -
Os037264_Os11t0    M I C S E G S N H Q E G P L N L D - - - - - - - - - - - - - - - - - - - - - - - - - - - - L S L D I C P R G E K R K R E
 
AT2G38300.1     - S W K K S R L M K D E E D R T V K I G - - Q E S T - - - - - L D L T L -
Os037264_Os11t0    C S W R K Q E - - E D H D H A T V A I G A D Q E A E S C A T G L S L S L F
 
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