fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G38880.6 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os021976 not found in 129aa AT4G14540.1 1st_not 0.808695652 II
Sb032742 not found in 609aa AT4G14540.1 1st_not 0.821739130 II
Gm028166 not found in 174aa AT2G37060.3 1st_not 0.826086956 II
Pt041090 not found in 189aa AT2G37060.3 1st_not 0.852173913 II
Pp037985 not found in 177aa AT4G14540.1 1st_not 0.756521739 II
Sm017738 not found in 125aa AT4G14540.1 1st_not 0.769565217 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G38880.6     ------MADTPSSPA----GDGGESGGS------------------VREQDRYLPIANIS
Os021976_Os05t0 ------MADGPGSPGG--GGGSHESG---SPRGGGGGGGGGGGGGGVREQDRFLPIANIS
pt041090_POPTR_ ------MADNPTSPA----AGSHESGGEQSPR------------SGVREQDRYLPIANIS
Sm017738_Selmo1 ------MADV-GSPRSQDSPHSDDAGG---------HG-GERDNSNVREQDRFLPIANIS
Sb032742_Sorbi1 RRPSRLTGRSPRTPRRPCRSASQSS----SP----------------------------S
gm028166_Glyma1 ------MSDAPASP-------SHESGGEQSPRG--------SLSGAAREQDRYLPIANIS
pp037985_Pp1s25 ------MAEA-GSPGSQDSPHSDDYGGN--------HGSGERDNSSVREQDRFLPIANIS
                       .    :*       . .                                   *

AT2G38880.6     RIMKKALPPNGKIGKDAKDTV----------------QECVSEFISFITSEASDKCQKEK
Os021976_Os05t0 RIMKKAIPANGKIAKDAKETV----------------QECVSEFISFITSEASDKCQREK
pt041090_POPTR_ RIMKKALPANGKIAKDAKDTV----------------QECVSEFISFVTSEASDKCQKEK
Sm017738_Selmo1 RIMKKALPANAKIAKDAKETV----------------QECVSEFISFITSEASDKCQREK
Sb032742_Sorbi1 SLAKRVTSARGRSGRPSTATTCCGPWPHWGLRTTLNHSRCTCR----STERASDKCQREK
gm028166_Glyma1 RIMKKALPPNGKIAKDAKDTM----------------QECVSEFISFITSEASEKCQKEK
pp037985_Pp1s25 RIMKKALPANAKIAKDAKETV----------------QECVSEFISFITSEASDKCQREK
                 : *:. ....: .: :. *                 ..*...     *..**:***:**

AT2G38880.6     RKTVNGDDLLWAMATLGFEDYLEPLKIYLARYREVW------------------------
Os021976_Os05t0 RKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREVR------------------------
pt041090_POPTR_ RKTINGDDLLWAMATLGFEDYIEPLKVYLARYRELE------------------------
Sm017738_Selmo1 RKTINGDDLLWAMSTLGFEEYLEPLKIYLQKYREVT------------------------
Sb032742_Sorbi1 RKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEMEGDSKLTAKTGDGSIKKDALGHV
gm028166_Glyma1 RKTINGDDLLWAMATLGFEDYIEPLKVYLARYREAE------------------------
pp037985_Pp1s25 RKTINGDDLLWAMSTLGFEDYVEPLKVYLHKYRETE------------------------
                ***:*********:*****:*:****:** :***                          

AT2G38880.6     ------------------------------------------------------------
Os021976_Os05t0 ------------------------------------------------------------
pt041090_POPTR_ ---------GDAKGSARGGDGSSKRDAVG----------GLPGQNA----------QFAF
Sm017738_Selmo1 ---------EL-------------------------------------------------
Sb032742_Sorbi1 GGSSSAAQGGDSKLTAKTGDGSIKKDALGHVGGSSSAAQGMGQQGAYNQGMGYMQPQMGQ
gm028166_Glyma1 ---------GDTKGSARSGDGSARPDQV-----------GLAGQNA----------QLVH
pp037985_Pp1s25 ---------GAL--TNKAGESSSGKKEGS----------GMVSPGV----------QMVQ
                                                                            

AT2G38880.6     ------------------------------------------
Os021976_Os05t0 ------------------------------------------
pt041090_POPTR_ QGSMNYTSPQHCLHLSPKD--PHIFNPGLIGKTGLTKCLAKN
Sm017738_Selmo1 ------------------------------------------
Sb032742_Sorbi1 QGAYN----QGMGYMQPQYHNGDISN----------------
gm028166_Glyma1 QGSLNYIG----LQVQPQ----HLVMPSMQGHE---------
pp037985_Pp1s25 QGGYN-------PYMQAQ-----MMNPGNYQVQHY-------
BoxShade v3.31 C (beta, 970507) Output
AT2G38880.6     - - - - - - M A D T P S S P A - - - - G D G G E S G G S - - - - - - - - - - - - - - - - - - V R E Q D R Y L P I A N I S
Os021976_Os05t0    - - - - - - M A D G P G S P G G - - G G G S H E S G - - - S P R G G G G G G G G G G G G G G V R E Q D R F L P I A N I S
pt041090_POPTR_    - - - - - - M A D N P T S P A - - - - A G S H E S G G E Q S P R - - - - - - - - - - - - S G V R E Q D R Y L P I A N I S
Sm017738_Selmo1    - - - - - - M A D V - G S P R S Q D S P H S D D A G G - - - - - - - - - H G - G E R D N S N V R E Q D R F L P I A N I S
Sb032742_Sorbi1    R R P S R L T G R S P R T P R R P C R S A S Q S S - - - - S P - - - - - - - - - - - - - - - - - - - - - - - - - - - - S
gm028166_Glyma1    - - - - - - M S D A P A S P - - - - - - - S H E S G G E Q S P R G - - - - - - - - S L S G A A R E Q D R Y L P I A N I S
pp037985_Pp1s25    - - - - - - M A E A - G S P G S Q D S P H S D D Y G G N - - - - - - - - H G S G E R D N S S V R E Q D R F L P I A N I S
 
AT2G38880.6     R I M K K A L P P N G K I G K D A K D T V - - - - - - - - - - - - - - - - Q E C V S E F I S F I T S E A S D K C Q K E K
Os021976_Os05t0    R I M K K A I P A N G K I A K D A K E T V - - - - - - - - - - - - - - - - Q E C V S E F I S F I T S E A S D K C Q R E K
pt041090_POPTR_    R I M K K A L P A N G K I A K D A K D T V - - - - - - - - - - - - - - - - Q E C V S E F I S F V T S E A S D K C Q K E K
Sm017738_Selmo1    R I M K K A L P A N A K I A K D A K E T V - - - - - - - - - - - - - - - - Q E C V S E F I S F I T S E A S D K C Q R E K
Sb032742_Sorbi1    S L A K R V T S A R G R S G R P S T A T T C C G P W P H W G L R T T L N H S R C T C R - - - - S T E R A S D K C Q R E K
gm028166_Glyma1    R I M K K A L P P N G K I A K D A K D T M - - - - - - - - - - - - - - - - Q E C V S E F I S F I T S E A S E K C Q K E K
pp037985_Pp1s25    R I M K K A L P A N A K I A K D A K E T V - - - - - - - - - - - - - - - - Q E C V S E F I S F I T S E A S D K C Q R E K
 
AT2G38880.6     R K T V N G D D L L W A M A T L G F E D Y L E P L K I Y L A R Y R E V W - - - - - - - - - - - - - - - - - - - - - - - -
Os021976_Os05t0    R K T I N G D D L L W A M A T L G F E D Y I E P L K V Y L Q K Y R E V R - - - - - - - - - - - - - - - - - - - - - - - -
pt041090_POPTR_    R K T I N G D D L L W A M A T L G F E D Y I E P L K V Y L A R Y R E L E - - - - - - - - - - - - - - - - - - - - - - - -
Sm017738_Selmo1    R K T I N G D D L L W A M S T L G F E E Y L E P L K I Y L Q K Y R E V T - - - - - - - - - - - - - - - - - - - - - - - -
Sb032742_Sorbi1    R K T I N G D D L L W A M A T L G F E D Y I E P L K V Y L Q K Y R E M E M E G D S K L T A K T G D G S I K K D A L G H V
gm028166_Glyma1    R K T I N G D D L L W A M A T L G F E D Y I E P L K V Y L A R Y R E A E - - - - - - - - - - - - - - - - - - - - - - - -
pp037985_Pp1s25    R K T I N G D D L L W A M S T L G F E D Y V E P L K V Y L H K Y R E T E - - - - - - - - - - - - - - - - - - - - - - - -
 
AT2G38880.6     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os021976_Os05t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt041090_POPTR_    - - - - - - - - - G D A K G S A R G G D G S S K R D A V G - - - - - - - - - - G L P G Q N A - - - - - - - - - - Q F A F
Sm017738_Selmo1    - - - - - - - - - E L - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb032742_Sorbi1    G G S S S A A Q G G D S K L T A K T G D G S I K K D A L G H V G G S S S A A Q G M G Q Q G A Y N Q G M G Y M Q P Q M G Q
gm028166_Glyma1    - - - - - - - - - G D T K G S A R S G D G S A R P D Q V - - - - - - - - - - - G L A G Q N A - - - - - - - - - - Q L V H
pp037985_Pp1s25    - - - - - - - - - G A L - - T N K A G E S S S G K K E G S - - - - - - - - - - G M V S P G V - - - - - - - - - - Q M V Q
 
AT2G38880.6     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Os021976_Os05t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt041090_POPTR_    Q G S M N Y T S P Q H C L H L S P K D - - P H I F N P G L I G K T G L T K C L A K N
Sm017738_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb032742_Sorbi1    Q G A Y N - - - - Q G M G Y M Q P Q Y H N G D I S N - - - - - - - - - - - - - - - -
gm028166_Glyma1    Q G S L N Y I G - - - - L Q V Q P Q - - - - H L V M P S M Q G H E - - - - - - - - -
pp037985_Pp1s25    Q G G Y N - - - - - - - P Y M Q A Q - - - - - M M N P G N Y Q V Q H Y - - - - - - -
 
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