fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G38880.6 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp037985 not found in 177aa AT4G14540.1 1st_not 0.756521739 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G38880.6     MADTPS-----SPAGD--GGESG------GSVREQDRYLPIANISRIMKKALPPNGKIGK
pp037985_Pp1s25 MAEAGSPGSQDSPHSDDYGGNHGSGERDNSSVREQDRFLPIANISRIMKKALPANAKIAK
                **:: *     ** .*  **: *      .*******:***************.*.**.*

AT2G38880.6     DAKDTVQECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLAR
pp037985_Pp1s25 DAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEDYVEPLKVYLHK
                ***:**********************:*****:*********:*******:****:** :

AT2G38880.6     YREVW----------------------------------------------------
pp037985_Pp1s25 YRETEGALTNKAGESSSGKKEGSGMVSPGVQMVQQGGYNPYMQAQMMNPGNYQVQHY
                ***.
BoxShade v3.31 C (beta, 970507) Output
AT2G38880.6     M A D T P S - - - - - S P A G D - - G G E S G - - - - - - G S V R E Q D R Y L P I A N I S R I M K K A L P P N G K I G K
pp037985_Pp1s25    M A E A G S P G S Q D S P H S D D Y G G N H G S G E R D N S S V R E Q D R F L P I A N I S R I M K K A L P A N A K I A K
 
AT2G38880.6     D A K D T V Q E C V S E F I S F I T S E A S D K C Q K E K R K T V N G D D L L W A M A T L G F E D Y L E P L K I Y L A R
pp037985_Pp1s25    D A K E T V Q E C V S E F I S F I T S E A S D K C Q R E K R K T I N G D D L L W A M S T L G F E D Y V E P L K V Y L H K
 
AT2G38880.6     Y R E V W - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pp037985_Pp1s25    Y R E T E G A L T N K A G E S S S G K K E G S G M V S P G V Q M V Q Q G G Y N P Y M Q A Q M M N P G N Y Q V Q H Y
 
0