fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G38880.6 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os021976 not found in 129aa AT4G14540.1 1st_not 0.808695652 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G38880.6     MADTPSSPAGDGGE-----------------SGGSVREQDRYLPIANISRIMKKALPPNG
Os021976_Os05t0 MADGPGSPGGGGGSHESGSPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANG
                *** *.**.*.**.                 .**.******:*************:*.**

AT2G38880.6     KIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKI
Os021976_Os05t0 KIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKV
                **.****:**********************:*****:*****************:****:

AT2G38880.6     YLARYREVW
Os021976_Os05t0 YLQKYREVR
                ** :****
BoxShade v3.31 C (beta, 970507) Output
AT2G38880.6     M A D T P S S P A G D G G E - - - - - - - - - - - - - - - - - S G G S V R E Q D R Y L P I A N I S R I M K K A L P P N G
Os021976_Os05t0    M A D G P G S P G G G G G S H E S G S P R G G G G G G G G G G G G G G V R E Q D R F L P I A N I S R I M K K A I P A N G
 
AT2G38880.6     K I G K D A K D T V Q E C V S E F I S F I T S E A S D K C Q K E K R K T V N G D D L L W A M A T L G F E D Y L E P L K I
Os021976_Os05t0    K I A K D A K E T V Q E C V S E F I S F I T S E A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y I E P L K V
 
AT2G38880.6     Y L A R Y R E V W
Os021976_Os05t0    Y L Q K Y R E V R
 
0