fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G38880.6 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb032742 not found in 609aa AT4G14540.1 1st_not 0.821739130 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G38880.6     ---------MADTPSSPAGDGGESGGSVREQDRYLPIANISRIMKKALPPNGKIGKDAKD
Sb032742_Sorbi1 RRPSRLTGRSPRTPRRPCRSASQS-------------SSPSSLAKRVTSARGRSGRPS--
                          . **  *. ...:*             :. * : *:. ...*: *: :  

AT2G38880.6     TVQECV--------------SEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDY
Sb032742_Sorbi1 TATTCCGPWPHWGLRTTLNHSRCTCRSTERASDKCQREKRKTINGDDLLWAMATLGFEDY
                *.  *               *.  .  *..******:*****:*****************

AT2G38880.6     LEPLKIYLARYREVW---------------------------------------------
Sb032742_Sorbi1 IEPLKVYLQKYREMEMEGDSKLTAKTGDGSIKKDALGHVGGSSSAAQGGDSKLTAKTGDG
                :****:** :***:                                              

AT2G38880.6     ------------------------------------------------------------
Sb032742_Sorbi1 SIKKDALGHVGGSSSAAQGMGQQGAYNQGMGYMQPQMGQQGAYNQGMGYMQPQYHNGDIS
                                                                            

AT2G38880.6     -
Sb032742_Sorbi1 N
BoxShade v3.31 C (beta, 970507) Output
AT2G38880.6     - - - - - - - - - M A D T P S S P A G D G G E S G G S V R E Q D R Y L P I A N I S R I M K K A L P P N G K I G K D A K D
Sb032742_Sorbi1    R R P S R L T G R S P R T P R R P C R S A S Q S - - - - - - - - - - - - - S S P S S L A K R V T S A R G R S G R P S - -
 
AT2G38880.6     T V Q E C V - - - - - - - - - - - - - - S E F I S F I T S E A S D K C Q K E K R K T V N G D D L L W A M A T L G F E D Y
Sb032742_Sorbi1    T A T T C C G P W P H W G L R T T L N H S R C T C R S T E R A S D K C Q R E K R K T I N G D D L L W A M A T L G F E D Y
 
AT2G38880.6     L E P L K I Y L A R Y R E V W - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb032742_Sorbi1    I E P L K V Y L Q K Y R E M E M E G D S K L T A K T G D G S I K K D A L G H V G G S S S A A Q G G D S K L T A K T G D G
 
AT2G38880.6     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Sb032742_Sorbi1    S I K K D A L G H V G G S S S A A Q G M G Q Q G A Y N Q G M G Y M Q P Q M G Q Q G A Y N Q G M G Y M Q P Q Y H N G D I S
 
AT2G38880.6     -
Sb032742_Sorbi1    N
 
0