fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G39900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031818 not found in 200aa AT3G55770.5 1st_not 0.834605597 II
Gm013522 not found in 224aa AT2G39900.1 not_1st 0.656488549 II
Gm019848 not found in 186aa AT2G39900.1 not_1st 0.648854961 II
Pt042160 not found in 189aa AT3G55770.5 1st_not 0.824427480 II
Pp016735 not found in 191aa AT3G55770.5 1st_not 0.643765903 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G39900.1     MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP
pt042160_POPTR_ MSFTGTQQKCKACEKTVYPMELLSTDGVAYHKSCFKCFHCKGTLKLSNYSSMEGVLYCKP
gm019848_Glyma0 MAFSGTQQKCKACDKTVHLVEGLSVDGAAYHKNCFRCSHCNGLLAISNYSSTEGVLYCKV
gm031818_Glyma1 MSFIGTQQKCKACEKTVYPVDQLSADGTAYHKACFRCSHCKGTLKLSNYSSMEGVLYCKP
pp016735_Pp1s80 MAFSGTTQKCKACEKTVYLVEQLTADGVVYHKSCFRCNHCKGTLKLANYASLEGVLYCKP
gm013522_Glyma0 MAFSGTQQKCKACDKTVHFVEGLSADGAAYHKNCFRCSHCNGLLAISNYSSTEGVLYCKV
                *:* ** ***:**:***: :: *:.**  *** **:* **:. * ::**:* ***:**: 

AT2G39900.1     HFEQLFKESGSFSKNFQ-SPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI
pt042160_POPTR_ HFDQLFKETGNFNKNFQ-SPAK-SAEKLTPELTRSPSKAAGMFSGTQEKCATCGKTAYPL
gm019848_Glyma0 HFEQLFKETGAYPKKSQ------SSGKPPLELNRAPSKLSAFFSGTQEKCSKCKKTVYPL
gm031818_Glyma1 HFEQLFKESGSFSKNFQ-SPAK-LADKTTHELTRSPSKAASMFSGTQEKCATCGKTAYPL
pp016735_Pp1s80 HFEQLLKVTGSFDKSFEHKPSE-GLKKAEKGENKAPSKASLMFSGTQEKCIACSKTVYPI
gm013522_Glyma0 HFEQLFKETGTYPKKSQ------SSGKPPLELNRAPSKLSAFFSGTQEKCSKCKKTVYPL
                **:**:* :* : *. :         *     .::**: : :*****:**  * **.**:

AT2G39900.1     EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS
pt042160_POPTR_ EKVTVESQAYHKSCFKCSHGGCAITPSNYAALEGVLYCKHHFSQLFKEKGSYNHLIKCAS
gm019848_Glyma0 EKLTVEGEFYHKSCFRCAHGGCFLTPSTYAALDGYLYCKPHFSQLFKEKGSYSYLSKQTS
gm031818_Glyma1 EKVTVEGQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLTKSAS
pp016735_Pp1s80 EKTTVEGLPYHKQCFKCVHGGCTISPSNYAALEGRLYCKPHYSQLFKEKGNYSQLTKAPA
gm013522_Glyma0 EKLTVEGEFYHKSCFRCAHGGCFLTPSTYAALDGYLYCKPHFSQLFKEKGSYSYLSKQAS
                ** ***.  ***.**:* **** ::**.****:* **** *::*******.*. * * .:

AT2G39900.1     IKRAT----------AAATAAAAAVAAVPES-------------------
pt042160_POPTR_ MKRAA--------------------APVPEA-------------------
gm019848_Glyma0 LKK------------KNNNNNNNR--------------------------
gm031818_Glyma1 VKRAAA---------AAATATATTVASVPES-------------------
pp016735_Pp1s80 LKVAA-------------------SQAITES-------------------
gm013522_Glyma0 LKKSEMQQQEQEAVEKATTTDDDRSESEPDTTTTTKEAEQADDDHSEQEH
                :*
BoxShade v3.31 C (beta, 970507) Output
AT2G39900.1     M S F T G T Q Q K C R A C E K T V Y P V E L L S A D G I S Y H K A C F K C S H C K S R L Q L S N Y S S M E G V V Y C R P
pt042160_POPTR_    M S F T G T Q Q K C K A C E K T V Y P M E L L S T D G V A Y H K S C F K C F H C K G T L K L S N Y S S M E G V L Y C K P
gm019848_Glyma0    M A F S G T Q Q K C K A C D K T V H L V E G L S V D G A A Y H K N C F R C S H C N G L L A I S N Y S S T E G V L Y C K V
gm031818_Glyma1    M S F I G T Q Q K C K A C E K T V Y P V D Q L S A D G T A Y H K A C F R C S H C K G T L K L S N Y S S M E G V L Y C K P
pp016735_Pp1s80    M A F S G T T Q K C K A C E K T V Y L V E Q L T A D G V V Y H K S C F R C N H C K G T L K L A N Y A S L E G V L Y C K P
gm013522_Glyma0    M A F S G T Q Q K C K A C D K T V H F V E G L S A D G A A Y H K N C F R C S H C N G L L A I S N Y S S T E G V L Y C K V
 
AT2G39900.1     H F E Q L F K E S G S F S K N F Q - S P A K P L T D K P T P E L N R T P S R L A G M F S G T Q D K C A T C T K T V Y P I
pt042160_POPTR_    H F D Q L F K E T G N F N K N F Q - S P A K - S A E K L T P E L T R S P S K A A G M F S G T Q E K C A T C G K T A Y P L
gm019848_Glyma0    H F E Q L F K E T G A Y P K K S Q - - - - - - S S G K P P L E L N R A P S K L S A F F S G T Q E K C S K C K K T V Y P L
gm031818_Glyma1    H F E Q L F K E S G S F S K N F Q - S P A K - L A D K T T H E L T R S P S K A A S M F S G T Q E K C A T C G K T A Y P L
pp016735_Pp1s80    H F E Q L L K V T G S F D K S F E H K P S E - G L K K A E K G E N K A P S K A S L M F S G T Q E K C I A C S K T V Y P I
gm013522_Glyma0    H F E Q L F K E T G T Y P K K S Q - - - - - - S S G K P P L E L N R A P S K L S A F F S G T Q E K C S K C K K T V Y P L
 
AT2G39900.1     E K V T V E S Q C Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A S
pt042160_POPTR_    E K V T V E S Q A Y H K S C F K C S H G G C A I T P S N Y A A L E G V L Y C K H H F S Q L F K E K G S Y N H L I K C A S
gm019848_Glyma0    E K L T V E G E F Y H K S C F R C A H G G C F L T P S T Y A A L D G Y L Y C K P H F S Q L F K E K G S Y S Y L S K Q T S
gm031818_Glyma1    E K V T V E G Q A Y H K S C F K C S H G G C P I T P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L T K S A S
pp016735_Pp1s80    E K T T V E G L P Y H K Q C F K C V H G G C T I S P S N Y A A L E G R L Y C K P H Y S Q L F K E K G N Y S Q L T K A P A
gm013522_Glyma0    E K L T V E G E F Y H K S C F R C A H G G C F L T P S T Y A A L D G Y L Y C K P H F S Q L F K E K G S Y S Y L S K Q A S
 
AT2G39900.1     I K R A T - - - - - - - - - - A A A T A A A A A V A A V P E S - - - - - - - - - - - - - - - - - - -
pt042160_POPTR_    M K R A A - - - - - - - - - - - - - - - - - - - - A P V P E A - - - - - - - - - - - - - - - - - - -
gm019848_Glyma0    L K K - - - - - - - - - - - - K N N N N N N N R - - - - - - - - - - - - - - - - - - - - - - - - - -
gm031818_Glyma1    V K R A A A - - - - - - - - - A A A T A T A T T V A S V P E S - - - - - - - - - - - - - - - - - - -
pp016735_Pp1s80    L K V A A - - - - - - - - - - - - - - - - - - - S Q A I T E S - - - - - - - - - - - - - - - - - - -
gm013522_Glyma0    L K K S E M Q Q Q E Q E A V E K A T T T D D D R S E S E P D T T T T T K E A E Q A D D D H S E Q E H
 
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