fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G39900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012304 not found in 196aa AT2G39900.1 1st_1st 0.791348600 Ia
Sb021836 not found in 376aa AT2G39900.1 1st_1st 0.753180661 Ia
Sm018045 not found in 180aa AT2G39900.1 1st_1st 0.653944020 Ia
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G39900.1     -------------------------------------------------------MSFTG
Sm018045_Selmo1 -------------------------------------------------------MAFAV
Sb021836_Sorbi1 ARQSGRRARRCSFLIHPTPRARRPRPDRALSQISPGGHDPRERERERGGLAGDREKMFSG
Os012304_Os03t0 --------------------------------------------------------MFSG
                                                                         *: 

AT2G39900.1     TQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRPHFEQL
Sm018045_Selmo1 RQQKCKSCEKTVYLVDQLSADGVLYHKACFRCQHCKGTLKLSNYASLEGVLYCKPHLEQL
Sb021836_Sorbi1 TQQKCKVCTKTVYPMDQLSTDGVAFHRSCFKCQHCKSTLSLSNYSSFEGVPYCKAHFEQL
Os012304_Os03t0 TQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKPHFEQL
                 ****: * **** :: **:**: :*::**:*.***. *.*.**:*:*** **:.*:***

AT2G39900.1     FKESGSFSKNF---QSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIEKV
Sm018045_Selmo1 FRKTGSFDKSFDSGKVPSKPVV-----------SKLSRLFSGTQEKCVSCSKTVYPLEKV
Sb021836_Sorbi1 FKETGSYNKSFQ-SQSPAKITPEKLAPELTRSPSKAARMFSGTQDKCATCGKTAYPLEKV
Os012304_Os03t0 FKETGSYNKSF---QSPAKPASEKLTPELTRSPSKAARMFSGTQEKCATCSKTAYPLEKV
                *:::**:.*.*   : *:*              *: : :*****:**.:* **.**:***

AT2G39900.1     TVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIKR
Sm018045_Selmo1 SVEGQSYHKSCFKCTHGGCVISPSNYAALEGMLYCKHHYSQLFMEKGNYSQLTKAASMKL
Sb021836_Sorbi1 TVEEKAYHKSCFKCSHGGCAITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKCASVKR
Os012304_Os03t0 TVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKCASVKR
                :** :.********:**** *:*********:******::*** ***.*.:* *.**:* 

AT2G39900.1     ATAAATAAA--AAVAAVPES
Sm018045_Selmo1 PAKTEL--------------
Sb021836_Sorbi1 AAEAQPEQP--ASDSS----
Os012304_Os03t0 -AEAQPAPPPAAADSS----
                 : :
BoxShade v3.31 C (beta, 970507) Output
AT2G39900.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M S F T G
Sm018045_Selmo1    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M A F A V
Sb021836_Sorbi1    A R Q S G R R A R R C S F L I H P T P R A R R P R P D R A L S Q I S P G G H D P R E R E R E R G G L A G D R E K M F S G
Os012304_Os03t0    - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M F S G
 
AT2G39900.1     T Q Q K C R A C E K T V Y P V E L L S A D G I S Y H K A C F K C S H C K S R L Q L S N Y S S M E G V V Y C R P H F E Q L
Sm018045_Selmo1    R Q Q K C K S C E K T V Y L V D Q L S A D G V L Y H K A C F R C Q H C K G T L K L S N Y A S L E G V L Y C K P H L E Q L
Sb021836_Sorbi1    T Q Q K C K V C T K T V Y P M D Q L S T D G V A F H R S C F K C Q H C K S T L S L S N Y S S F E G V P Y C K A H F E Q L
Os012304_Os03t0    T Q Q K C K V C T K T V Y P M D Q L S T D G V V F H R S C F K C Q H C K S T L S L G N Y S S I E G V P Y C K P H F E Q L
 
AT2G39900.1     F K E S G S F S K N F - - - Q S P A K P L T D K P T P E L N R T P S R L A G M F S G T Q D K C A T C T K T V Y P I E K V
Sm018045_Selmo1    F R K T G S F D K S F D S G K V P S K P V V - - - - - - - - - - - S K L S R L F S G T Q E K C V S C S K T V Y P L E K V
Sb021836_Sorbi1    F K E T G S Y N K S F Q - S Q S P A K I T P E K L A P E L T R S P S K A A R M F S G T Q D K C A T C G K T A Y P L E K V
Os012304_Os03t0    F K E T G S Y N K S F - - - Q S P A K P A S E K L T P E L T R S P S K A A R M F S G T Q E K C A T C S K T A Y P L E K V
 
AT2G39900.1     T V E S Q C Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A S I K R
Sm018045_Selmo1    S V E G Q S Y H K S C F K C T H G G C V I S P S N Y A A L E G M L Y C K H H Y S Q L F M E K G N Y S Q L T K A A S M K L
Sb021836_Sorbi1    T V E E K A Y H K S C F K C S H G G C A I T P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L I K C A S V K R
Os012304_Os03t0    T V E G Q A Y H K S C F K C S H G G C A I S P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L I K C A S V K R
 
AT2G39900.1     A T A A A T A A A - - A A V A A V P E S
Sm018045_Selmo1    P A K T E L - - - - - - - - - - - - - -
Sb021836_Sorbi1    A A E A Q P E Q P - - A S D S S - - - -
Os012304_Os03t0    - A E A Q P A P P P A A A D S S - - - -
 
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