fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G39900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pp016735 not found in 191aa AT3G55770.5 1st_not 0.643765903 II
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G39900.1     MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP
pp016735_Pp1s80 MAFSGTTQKCKACEKTVYLVEQLTADGVVYHKSCFRCNHCKGTLKLANYASLEGVLYCKP
                *:*:** ***:******* ** *:***: ***:**:*.***. *:*:**:*:***:**:*

AT2G39900.1     HFEQLFKESGSFSKNFQ-SPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPI
pp016735_Pp1s80 HFEQLLKVTGSFDKSFEHKPSEGLKKAEKGE-NKAPSKASLMFSGTQEKCIACSKTVYPI
                *****:* :***.*.*: .*:: *..  . * *::**: : ******:** :*:******

AT2G39900.1     EKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSAS
pp016735_Pp1s80 EKTTVEGLPYHKQCFKCVHGGCTISPSNYAALEGRLYCKPHYSQLFKEKGNYSQLTKAPA
                **.***.  ***.**** ****.*********** **** *::*******.*.:* *:.:

AT2G39900.1     IKRATAAATAAAAAVAAVPES
pp016735_Pp1s80 LK---------VAASQAITES
                :*         .**  *:.**
BoxShade v3.31 C (beta, 970507) Output
AT2G39900.1     M S F T G T Q Q K C R A C E K T V Y P V E L L S A D G I S Y H K A C F K C S H C K S R L Q L S N Y S S M E G V V Y C R P
pp016735_Pp1s80    M A F S G T T Q K C K A C E K T V Y L V E Q L T A D G V V Y H K S C F R C N H C K G T L K L A N Y A S L E G V L Y C K P
 
AT2G39900.1     H F E Q L F K E S G S F S K N F Q - S P A K P L T D K P T P E L N R T P S R L A G M F S G T Q D K C A T C T K T V Y P I
pp016735_Pp1s80    H F E Q L L K V T G S F D K S F E H K P S E G L K K A E K G E - N K A P S K A S L M F S G T Q E K C I A C S K T V Y P I
 
AT2G39900.1     E K V T V E S Q C Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A S
pp016735_Pp1s80    E K T T V E G L P Y H K Q C F K C V H G G C T I S P S N Y A A L E G R L Y C K P H Y S Q L F K E K G N Y S Q L T K A P A
 
AT2G39900.1     I K R A T A A A T A A A A A V A A V P E S
pp016735_Pp1s80    L K - - - - - - - - - V A A S Q A I T E S
 
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