fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G39900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Os012304 not found in 196aa AT2G39900.1 1st_1st 0.791348600 Ia
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G39900.1     MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP
Os012304_Os03t0 -MFSGTQQKCKVCTKTVYPMDQLSTDGVVFHRSCFKCQHCKSTLSLGNYSSIEGVPYCKP
                  *:******:.* *****:: **:**: :*::****.**** *.*.****:*** **:*

AT2G39900.1     HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE
Os012304_Os03t0 HFEQLFKETGSYNKSFQSPAKPASEKLTPELTRSPSKAARMFSGTQEKCATCSKTAYPLE
                ********:**:.*.******* ::* ****.*:**: * ******:*****:**.**:*

AT2G39900.1     KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI
Os012304_Os03t0 KVTVEGQAYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKCASV
                *****.*.*************.*******************:**************.**:

AT2G39900.1     KRATAAATAAAAAVAAVPES
Os012304_Os03t0 KRAEAQPAPPPAAADSS---
                *** * .:...**. :
BoxShade v3.31 C (beta, 970507) Output
AT2G39900.1     M S F T G T Q Q K C R A C E K T V Y P V E L L S A D G I S Y H K A C F K C S H C K S R L Q L S N Y S S M E G V V Y C R P
Os012304_Os03t0    - M F S G T Q Q K C K V C T K T V Y P M D Q L S T D G V V F H R S C F K C Q H C K S T L S L G N Y S S I E G V P Y C K P
 
AT2G39900.1     H F E Q L F K E S G S F S K N F Q S P A K P L T D K P T P E L N R T P S R L A G M F S G T Q D K C A T C T K T V Y P I E
Os012304_Os03t0    H F E Q L F K E T G S Y N K S F Q S P A K P A S E K L T P E L T R S P S K A A R M F S G T Q E K C A T C S K T A Y P L E
 
AT2G39900.1     K V T V E S Q C Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A S I
Os012304_Os03t0    K V T V E G Q A Y H K S C F K C S H G G C A I S P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L I K C A S V
 
AT2G39900.1     K R A T A A A T A A A A A V A A V P E S
Os012304_Os03t0    K R A E A Q P A P P P A A A D S S - - -
 
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