fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G39900.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031818 not found in 200aa AT3G55770.5 1st_not 0.834605597 II
Gm013522 not found in 224aa AT2G39900.1 not_1st 0.656488549 II
Gm019848 not found in 186aa AT2G39900.1 not_1st 0.648854961 II
Get sequence file
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G39900.1     MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP
gm019848_Glyma0 MAFSGTQQKCKACDKTVHLVEGLSVDGAAYHKNCFRCSHCNGLLAISNYSSTEGVLYCKV
gm031818_Glyma1 MSFIGTQQKCKACEKTVYPVDQLSADGTAYHKACFRCSHCKGTLKLSNYSSMEGVLYCKP
gm013522_Glyma0 MAFSGTQQKCKACDKTVHFVEGLSADGAAYHKNCFRCSHCNGLLAISNYSSTEGVLYCKV
                *:* ******:**:***: *: **.** :*** **:****:. * :***** ***:**: 

AT2G39900.1     HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE
gm019848_Glyma0 HFEQLFKETGAYPKKSQSSGK-----PPLELNRAPSKLSAFFSGTQEKCSKCKKTVYPLE
gm031818_Glyma1 HFEQLFKESGSFSKNFQSPAK-LADKTTHELTRSPSKAASMFSGTQEKCATCGKTAYPLE
gm013522_Glyma0 HFEQLFKETGTYPKKSQSSGK-----PPLELNRAPSKLSAFFSGTQEKCSKCKKTVYPLE
                ********:*::.*: **..*     .. **.*:**: :.:*****:**:.* **.**:*

AT2G39900.1     KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI
gm019848_Glyma0 KLTVEGEFYHKSCFRCAHGGCFLTPSTYAALDGYLYCKPHFSQLFKEKGSYSYLSKQTSL
gm031818_Glyma1 KVTVEGQAYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLTKSASV
gm013522_Glyma0 KLTVEGEFYHKSCFRCAHGGCFLTPSTYAALDGYLYCKPHFSQLFKEKGSYSYLSKQASL
                *:***.: ******:*:**** ::**.****:* **** **:*********.:* *.:*:

AT2G39900.1     KR----------ATAAATAAAAAVAAVPES-------------------
gm019848_Glyma0 KK------------KNNNNNNNR--------------------------
gm031818_Glyma1 KR---------AAAAAATATATTVASVPES-------------------
gm013522_Glyma0 KKSEMQQQEQEAVEKATTTDDDRSESEPDTTTTTKEAEQADDDHSEQEH
                *:               .
BoxShade v3.31 C (beta, 970507) Output
AT2G39900.1     M S F T G T Q Q K C R A C E K T V Y P V E L L S A D G I S Y H K A C F K C S H C K S R L Q L S N Y S S M E G V V Y C R P
gm019848_Glyma0    M A F S G T Q Q K C K A C D K T V H L V E G L S V D G A A Y H K N C F R C S H C N G L L A I S N Y S S T E G V L Y C K V
gm031818_Glyma1    M S F I G T Q Q K C K A C E K T V Y P V D Q L S A D G T A Y H K A C F R C S H C K G T L K L S N Y S S M E G V L Y C K P
gm013522_Glyma0    M A F S G T Q Q K C K A C D K T V H F V E G L S A D G A A Y H K N C F R C S H C N G L L A I S N Y S S T E G V L Y C K V
 
AT2G39900.1     H F E Q L F K E S G S F S K N F Q S P A K P L T D K P T P E L N R T P S R L A G M F S G T Q D K C A T C T K T V Y P I E
gm019848_Glyma0    H F E Q L F K E T G A Y P K K S Q S S G K - - - - - P P L E L N R A P S K L S A F F S G T Q E K C S K C K K T V Y P L E
gm031818_Glyma1    H F E Q L F K E S G S F S K N F Q S P A K - L A D K T T H E L T R S P S K A A S M F S G T Q E K C A T C G K T A Y P L E
gm013522_Glyma0    H F E Q L F K E T G T Y P K K S Q S S G K - - - - - P P L E L N R A P S K L S A F F S G T Q E K C S K C K K T V Y P L E
 
AT2G39900.1     K V T V E S Q C Y H K S C F K C S H G G C P I S P S N Y A A L E G I L Y C K H H F A Q L F K E K G S Y N H L I K S A S I
gm019848_Glyma0    K L T V E G E F Y H K S C F R C A H G G C F L T P S T Y A A L D G Y L Y C K P H F S Q L F K E K G S Y S Y L S K Q T S L
gm031818_Glyma1    K V T V E G Q A Y H K S C F K C S H G G C P I T P S N Y A A L E G I L Y C K H H F S Q L F K E K G S Y N H L T K S A S V
gm013522_Glyma0    K L T V E G E F Y H K S C F R C A H G G C F L T P S T Y A A L D G Y L Y C K P H F S Q L F K E K G S Y S Y L S K Q A S L
 
AT2G39900.1     K R - - - - - - - - - - A T A A A T A A A A A V A A V P E S - - - - - - - - - - - - - - - - - - -
gm019848_Glyma0    K K - - - - - - - - - - - - K N N N N N N N R - - - - - - - - - - - - - - - - - - - - - - - - - -
gm031818_Glyma1    K R - - - - - - - - - A A A A A A T A T A T T V A S V P E S - - - - - - - - - - - - - - - - - - -
gm013522_Glyma0    K K S E M Q Q Q E Q E A V E K A T T T D D D R S E S E P D T T T T T K E A E Q A D D D H S E Q E H
 
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