Input
| Putative repression domain
|
|
AT2G40140.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt035816 |
not found in 612aa |
AT2G40140.2 |
1st_not |
0.538330494 |
II |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G40140.1 MC-GAKSNLCSSKTLTEVEFMRQKSEDGASATCLLEFAACDDLSSFKREIEENPSVEIDE
pt035816_POPTR_ MCTGSKSDLPPLNPIMEDKSYSQKGSLLYKCSVLLELSASDDLAGFKIEVEQK-GLDIDE
** *:**:* . :.: * : **.. ..: ***::*.***:.** *:*:: .::***
AT2G40140.1 SGFWYCRRVGSKKMGFEERTPLMVAAMYGSMEVLNYIIATGRSDVNRVCSDEKVTALHCA
pt035816_POPTR_ ASYWYGRRIGLKKMGFEERTPLMIAAMFGSAHVLKYIIETGKVNVNRVCGSDRVTALHCA
:.:** **:* ************:***:** .**:*** **: :*****..::*******
AT2G40140.1 VSGCSVSIVEIIKILLDASASPNCVDANGNKPVDLLAKDSRFVPNQSRKAVEVLLTGIHG
pt035816_POPTR_ VAGGADSSVGVVKLLLDASADPNSVDGNGNKPGDLFAPSSKWLCNSRKKMIELLLKG--E
*:* : * * ::*:******.**.**.***** **:* .*::: *. :* :*:**.*
AT2G40140.1 SVMEEEEEELKSVVT-----------KYPADASLPDINEGVYGTDDFRMFSFKVKPCSRA
pt035816_POPTR_ SLSEDEEEKL--IITPQLAREGIEKKEYPLDVTLPDINNGIYGTDEFRMYSFKVKPCSRA
*: *:***:* ::* :** *.:*****:*:****:***:**********
AT2G40140.1 YSHDWTECPFVHPGENARRRDPRKYPYTCVPCPEFRKGSCPKGDSCEYAHGVFESWLHPA
pt035816_POPTR_ YSHDWTECPFVHPGENARRRDPKKYPYSCVPCPEFRKGTCQKGDYCEYAHGVFESWLHPA
**********************:****:**********:* *** ***************
AT2G40140.1 QYRTRLCKDETGCARRVCFFAHRRDELRPVNASTGSAMVSPRSSNQSPEMSVMSPLTLGS
pt035816_POPTR_ QYRTRLCKDETGCARKVCFFAHKPEELRPVYAATGSAMPSQRSTSSAVDMATLSPLALGS
***************:******: :***** *:***** * **:..: :*:.:***:***
AT2G40140.1 S---------PMNSPMANGVPLSPRNGGLWQNRVNSLTPPPLQLNGSRLKSTLSARDMDM
pt035816_POPTR_ SSLSLPGTSTPPMSPLA-AVSSSPKSGGLWQNKV-SLTPPALQLPGSRLKTAFCARDLDL
* * **:* .*. **:.******:* *****.*** *****:::.***:*:
AT2G40140.1 EMELRFRGLDNRRLGDLKPSNLEETFGSYDSASVMQLQSPS-RHSQMNHYP-----SSPV
pt035816_POPTR_ EMEL--LGLEN-----LKPTTLDDVFGSLDPSLMSPMQGVSLKASTQTHYPAANLSSSPA
**** **:* ***:.*::.*** *.: : :*. * : * .*** ***.
AT2G40140.1 RQPPPHGFESSAAMAAAVMNARSSAFAKRSLSFKPAP-VASNVSDWGSPNGKLEWGMQRD
pt035816_POPTR_ RNPTSYGFDTSAAVAAAVMNSRSSAFAKRSQTANSASMMSSNLSDWNSPNGKLDWGIQGD
*:*..:**::***:******:********* : :.*. ::**:***.******:**:* *
AT2G40140.1 ELNKLRRSASFGIHGNNNNSVSRPARDYS--DEPDVSWVNSLVKENAPERVNERVGNTVN
pt035816_POPTR_ ELNKLKKSASFGFRSNNNPATTAASLTASHVDEPDVSWVNSLVKDVPP------AGSTFF
*****::*****::.*** :.: .: * *************: .* .*.*.
AT2G40140.1 GAASRDKFK------LPSWAEQMYIDHEQQIVA
pt035816_POPTR_ GAEKQYSRREGVPDSLPPWMEQMYREQEQMVA-
** .: . : **.* **** ::** :.
BoxShade v3.31 C (beta, 970507) Output
AT2G40140.1 |
M |
C |
- |
G |
A |
K |
S |
N |
L |
C |
S |
S |
K |
T |
L |
T |
E |
V |
E |
F |
M |
R |
Q |
K |
S |
E |
D |
G |
A |
S |
A |
T |
C |
L |
L |
E |
F |
A |
A |
C |
D |
D |
L |
S |
S |
F |
K |
R |
E |
I |
E |
E |
N |
P |
S |
V |
E |
I |
D |
E |
pt035816_POPTR_ |
M |
C |
T |
G |
S |
K |
S |
D |
L |
P |
P |
L |
N |
P |
I |
M |
E |
D |
K |
S |
Y |
S |
Q |
K |
G |
S |
L |
L |
Y |
K |
C |
S |
V |
L |
L |
E |
L |
S |
A |
S |
D |
D |
L |
A |
G |
F |
K |
I |
E |
V |
E |
Q |
K |
- |
G |
L |
D |
I |
D |
E |
|
AT2G40140.1 |
S |
G |
F |
W |
Y |
C |
R |
R |
V |
G |
S |
K |
K |
M |
G |
F |
E |
E |
R |
T |
P |
L |
M |
V |
A |
A |
M |
Y |
G |
S |
M |
E |
V |
L |
N |
Y |
I |
I |
A |
T |
G |
R |
S |
D |
V |
N |
R |
V |
C |
S |
D |
E |
K |
V |
T |
A |
L |
H |
C |
A |
pt035816_POPTR_ |
A |
S |
Y |
W |
Y |
G |
R |
R |
I |
G |
L |
K |
K |
M |
G |
F |
E |
E |
R |
T |
P |
L |
M |
I |
A |
A |
M |
F |
G |
S |
A |
H |
V |
L |
K |
Y |
I |
I |
E |
T |
G |
K |
V |
N |
V |
N |
R |
V |
C |
G |
S |
D |
R |
V |
T |
A |
L |
H |
C |
A |
|
AT2G40140.1 |
V |
S |
G |
C |
S |
V |
S |
I |
V |
E |
I |
I |
K |
I |
L |
L |
D |
A |
S |
A |
S |
P |
N |
C |
V |
D |
A |
N |
G |
N |
K |
P |
V |
D |
L |
L |
A |
K |
D |
S |
R |
F |
V |
P |
N |
Q |
S |
R |
K |
A |
V |
E |
V |
L |
L |
T |
G |
I |
H |
G |
pt035816_POPTR_ |
V |
A |
G |
G |
A |
D |
S |
S |
V |
G |
V |
V |
K |
L |
L |
L |
D |
A |
S |
A |
D |
P |
N |
S |
V |
D |
G |
N |
G |
N |
K |
P |
G |
D |
L |
F |
A |
P |
S |
S |
K |
W |
L |
C |
N |
S |
R |
K |
K |
M |
I |
E |
L |
L |
L |
K |
G |
- |
- |
E |
|
AT2G40140.1 |
S |
V |
M |
E |
E |
E |
E |
E |
E |
L |
K |
S |
V |
V |
T |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
K |
Y |
P |
A |
D |
A |
S |
L |
P |
D |
I |
N |
E |
G |
V |
Y |
G |
T |
D |
D |
F |
R |
M |
F |
S |
F |
K |
V |
K |
P |
C |
S |
R |
A |
pt035816_POPTR_ |
S |
L |
S |
E |
D |
E |
E |
E |
K |
L |
- |
- |
I |
I |
T |
P |
Q |
L |
A |
R |
E |
G |
I |
E |
K |
K |
E |
Y |
P |
L |
D |
V |
T |
L |
P |
D |
I |
N |
N |
G |
I |
Y |
G |
T |
D |
E |
F |
R |
M |
Y |
S |
F |
K |
V |
K |
P |
C |
S |
R |
A |
|
AT2G40140.1 |
Y |
S |
H |
D |
W |
T |
E |
C |
P |
F |
V |
H |
P |
G |
E |
N |
A |
R |
R |
R |
D |
P |
R |
K |
Y |
P |
Y |
T |
C |
V |
P |
C |
P |
E |
F |
R |
K |
G |
S |
C |
P |
K |
G |
D |
S |
C |
E |
Y |
A |
H |
G |
V |
F |
E |
S |
W |
L |
H |
P |
A |
pt035816_POPTR_ |
Y |
S |
H |
D |
W |
T |
E |
C |
P |
F |
V |
H |
P |
G |
E |
N |
A |
R |
R |
R |
D |
P |
K |
K |
Y |
P |
Y |
S |
C |
V |
P |
C |
P |
E |
F |
R |
K |
G |
T |
C |
Q |
K |
G |
D |
Y |
C |
E |
Y |
A |
H |
G |
V |
F |
E |
S |
W |
L |
H |
P |
A |
|
AT2G40140.1 |
Q |
Y |
R |
T |
R |
L |
C |
K |
D |
E |
T |
G |
C |
A |
R |
R |
V |
C |
F |
F |
A |
H |
R |
R |
D |
E |
L |
R |
P |
V |
N |
A |
S |
T |
G |
S |
A |
M |
V |
S |
P |
R |
S |
S |
N |
Q |
S |
P |
E |
M |
S |
V |
M |
S |
P |
L |
T |
L |
G |
S |
pt035816_POPTR_ |
Q |
Y |
R |
T |
R |
L |
C |
K |
D |
E |
T |
G |
C |
A |
R |
K |
V |
C |
F |
F |
A |
H |
K |
P |
E |
E |
L |
R |
P |
V |
Y |
A |
A |
T |
G |
S |
A |
M |
P |
S |
Q |
R |
S |
T |
S |
S |
A |
V |
D |
M |
A |
T |
L |
S |
P |
L |
A |
L |
G |
S |
|
AT2G40140.1 |
S |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
M |
N |
S |
P |
M |
A |
N |
G |
V |
P |
L |
S |
P |
R |
N |
G |
G |
L |
W |
Q |
N |
R |
V |
N |
S |
L |
T |
P |
P |
P |
L |
Q |
L |
N |
G |
S |
R |
L |
K |
S |
T |
L |
S |
A |
R |
D |
M |
D |
M |
pt035816_POPTR_ |
S |
S |
L |
S |
L |
P |
G |
T |
S |
T |
P |
P |
M |
S |
P |
L |
A |
- |
A |
V |
S |
S |
S |
P |
K |
S |
G |
G |
L |
W |
Q |
N |
K |
V |
- |
S |
L |
T |
P |
P |
A |
L |
Q |
L |
P |
G |
S |
R |
L |
K |
T |
A |
F |
C |
A |
R |
D |
L |
D |
L |
|
AT2G40140.1 |
E |
M |
E |
L |
R |
F |
R |
G |
L |
D |
N |
R |
R |
L |
G |
D |
L |
K |
P |
S |
N |
L |
E |
E |
T |
F |
G |
S |
Y |
D |
S |
A |
S |
V |
M |
Q |
L |
Q |
S |
P |
S |
- |
R |
H |
S |
Q |
M |
N |
H |
Y |
P |
- |
- |
- |
- |
- |
S |
S |
P |
V |
pt035816_POPTR_ |
E |
M |
E |
L |
- |
- |
L |
G |
L |
E |
N |
- |
- |
- |
- |
- |
L |
K |
P |
T |
T |
L |
D |
D |
V |
F |
G |
S |
L |
D |
P |
S |
L |
M |
S |
P |
M |
Q |
G |
V |
S |
L |
K |
A |
S |
T |
Q |
T |
H |
Y |
P |
A |
A |
N |
L |
S |
S |
S |
P |
A |
|
AT2G40140.1 |
R |
Q |
P |
P |
P |
H |
G |
F |
E |
S |
S |
A |
A |
M |
A |
A |
A |
V |
M |
N |
A |
R |
S |
S |
A |
F |
A |
K |
R |
S |
L |
S |
F |
K |
P |
A |
P |
- |
V |
A |
S |
N |
V |
S |
D |
W |
G |
S |
P |
N |
G |
K |
L |
E |
W |
G |
M |
Q |
R |
D |
pt035816_POPTR_ |
R |
N |
P |
T |
S |
Y |
G |
F |
D |
T |
S |
A |
A |
V |
A |
A |
A |
V |
M |
N |
S |
R |
S |
S |
A |
F |
A |
K |
R |
S |
Q |
T |
A |
N |
S |
A |
S |
M |
M |
S |
S |
N |
L |
S |
D |
W |
N |
S |
P |
N |
G |
K |
L |
D |
W |
G |
I |
Q |
G |
D |
|
AT2G40140.1 |
E |
L |
N |
K |
L |
R |
R |
S |
A |
S |
F |
G |
I |
H |
G |
N |
N |
N |
N |
S |
V |
S |
R |
P |
A |
R |
D |
Y |
S |
- |
- |
D |
E |
P |
D |
V |
S |
W |
V |
N |
S |
L |
V |
K |
E |
N |
A |
P |
E |
R |
V |
N |
E |
R |
V |
G |
N |
T |
V |
N |
pt035816_POPTR_ |
E |
L |
N |
K |
L |
K |
K |
S |
A |
S |
F |
G |
F |
R |
S |
N |
N |
N |
P |
A |
T |
T |
A |
A |
S |
L |
T |
A |
S |
H |
V |
D |
E |
P |
D |
V |
S |
W |
V |
N |
S |
L |
V |
K |
D |
V |
P |
P |
- |
- |
- |
- |
- |
- |
A |
G |
S |
T |
F |
F |
|
AT2G40140.1 |
G |
A |
A |
S |
R |
D |
K |
F |
K |
- |
- |
- |
- |
- |
- |
L |
P |
S |
W |
A |
E |
Q |
M |
Y |
I |
D |
H |
E |
Q |
Q |
I |
V |
A |
pt035816_POPTR_ |
G |
A |
E |
K |
Q |
Y |
S |
R |
R |
E |
G |
V |
P |
D |
S |
L |
P |
P |
W |
M |
E |
Q |
M |
Y |
R |
E |
Q |
E |
Q |
M |
V |
A |
- |
|
|