fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024730 not found in 265aa AT2G40200.1 1st_1st 0.282973621 Ib
Gm031874 not found in 279aa AT2G40200.1 1st_1st 0.383693045 Ib
Pt034010 not found in 259aa AT2G40200.1 1st_1st 0.374100719 Ib
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Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-2 (v7.475)


AT2G40200.1     --------------------MENSYDSSKWSDSTTPYMVSWSLQSESSDSDWNRFNLGFS
Sb024730_Sorbi1 --------------MAACQPLQ-----------------GKELQ----------------
pt034010_POPTR_ --------------------MEDHYSP------------CWPAA--PAEANWDQTSAAVY
gm031874_Glyma1 MGDKRLRNHGRNFRMVSIVTMENYYDS------------GWHM----GTSNWAQCSDHSS
                                    ::                                      

AT2G40200.1     SSSF------------------------GGNFPADDCVGGIEKAESLSRS---HRLAEKR
Sb024730_Sorbi1 ------PV--LLPRQASSAPRAV-----RVAPPEMSSSSGSGRSTTEARALKIHSEAERR
pt034010_POPTR_ DESFLVPC----PSHASASANFQVYGFPSWSVPLQE--ASEDKAASSSKS---HSQAEKR
gm031874_Glyma1 SSSFAVPTQQILPHHVTDAASLQFGEFHSWSLPIEG--AAEERAISASKS---HRQAEKR
                                                *     ..  :: : :::   *  **:*

AT2G40200.1     RRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAE-SPIFQDLPTEADEVT
Sb024730_Sorbi1 RRERINAHLATLRRMIPDTRQMDKATLLARVVEQVKLLKRNASEATTQSVPLPPETDEVS
pt034010_POPTR_ RRDRINAQLGILRKLVPKSEKMDKAALLGSAIDHVKDLKQKATE-ISRTFTIPTEVDEVT
gm031874_Glyma1 RRDRINAQLATLRKLIPKSDKMDKAALLGSVIDQVKDLKRKAMD-VSRAFTVPTEIDEVS
                **:***::*  **:::*.: ::***:**. .:::** **::* :  .    :*.* ***:

AT2G40200.1     VQPE-TISDFESNTNT------IIFKASFCCEDQPEAISEIIRVLTKLQLETIQAEIISV
Sb024730_Sorbi1 IE----LHTGAGADKV------IYIKASISCDDRPDLVAGLAQAFHGLRLRTVRADMTSL
pt034010_POPTR_ VDCD--VSQVTSPPSTNKDKDNTFIRASVCCDDRPELFSELITVLKGLRLTIVRADIASV
gm031874_Glyma1 IHHDHVLQDESCTEKVNKLKDNIVIKASVCCDDRPELFPELIQVLKGLRLTAVKADIASV
                :.    :       ..        ::**..*:*:*: .. :  .:  *:*  ::*:: *:

AT2G40200.1     GGRMRINFILKDSNCNETTNI-------AASAKALKQSLCSALNRITSSSTTTSSVCRIR
Sb024730_Sorbi1 GGRVQHVFVL----CKEEGWGGAGVGAASASLRSLKEAVRQALARVASPETAYGSSSPFQ
pt034010_POPTR_ GGRVKSILVL----CSECSEEG------SVSISTIKQSLNLVLSRIA-SSSVPSN-YRIR
gm031874_Glyma1 GGRIKSILVL----CSKDSE--------SVCLATLKQSLKSAITKIASSSSMASS-CPSR
                ***::  ::*    *.:           :..  ::*:::  .: ::: ..:  ..    :

AT2G40200.1     SKRQRWFLSSHYSHNE-
Sb024730_Sorbi1 SKRQR-ILESHYSIMSI
pt034010_POPTR_ SKRQRFFLPSHLSEQYE
gm031874_Glyma1 SKRQRFFLPSHCLQ---
                ***** :* **
BoxShade v3.31 C (beta, 970507) Output
AT2G40200.1     - - - - - - - - - - - - - - - - - - - - M E N S Y D S S K W S D S T T P Y M V S W S L Q S E S S D S D W N R F N L G F S
Sb024730_Sorbi1    - - - - - - - - - - - - - - M A A C Q P L Q - - - - - - - - - - - - - - - - - G K E L Q - - - - - - - - - - - - - - - -
pt034010_POPTR_    - - - - - - - - - - - - - - - - - - - - M E D H Y S P - - - - - - - - - - - - C W P A A - - P A E A N W D Q T S A A V Y
gm031874_Glyma1    M G D K R L R N H G R N F R M V S I V T M E N Y Y D S - - - - - - - - - - - - G W H M - - - - G T S N W A Q C S D H S S
 
AT2G40200.1     S S S F - - - - - - - - - - - - - - - - - - - - - - - - G G N F P A D D C V G G I E K A E S L S R S - - - H R L A E K R
Sb024730_Sorbi1    - - - - - - P V - - L L P R Q A S S A P R A V - - - - - R V A P P E M S S S S G S G R S T T E A R A L K I H S E A E R R
pt034010_POPTR_    D E S F L V P C - - - - P S H A S A S A N F Q V Y G F P S W S V P L Q E - - A S E D K A A S S S K S - - - H S Q A E K R
gm031874_Glyma1    S S S F A V P T Q Q I L P H H V T D A A S L Q F G E F H S W S L P I E G - - A A E E R A I S A S K S - - - H R Q A E K R
 
AT2G40200.1     R R D R I N S H L T A L R K L V P N S D K L D K A A L L A T V I E Q V K E L K Q K A A E - S P I F Q D L P T E A D E V T
Sb024730_Sorbi1    R R E R I N A H L A T L R R M I P D T R Q M D K A T L L A R V V E Q V K L L K R N A S E A T T Q S V P L P P E T D E V S
pt034010_POPTR_    R R D R I N A Q L G I L R K L V P K S E K M D K A A L L G S A I D H V K D L K Q K A T E - I S R T F T I P T E V D E V T
gm031874_Glyma1    R R D R I N A Q L A T L R K L I P K S D K M D K A A L L G S V I D Q V K D L K R K A M D - V S R A F T V P T E I D E V S
 
AT2G40200.1     V Q P E - T I S D F E S N T N T - - - - - - I I F K A S F C C E D Q P E A I S E I I R V L T K L Q L E T I Q A E I I S V
Sb024730_Sorbi1    I E - - - - L H T G A G A D K V - - - - - - I Y I K A S I S C D D R P D L V A G L A Q A F H G L R L R T V R A D M T S L
pt034010_POPTR_    V D C D - - V S Q V T S P P S T N K D K D N T F I R A S V C C D D R P E L F S E L I T V L K G L R L T I V R A D I A S V
gm031874_Glyma1    I H H D H V L Q D E S C T E K V N K L K D N I V I K A S V C C D D R P E L F P E L I Q V L K G L R L T A V K A D I A S V
 
AT2G40200.1     G G R M R I N F I L K D S N C N E T T N I - - - - - - - A A S A K A L K Q S L C S A L N R I T S S S T T T S S V C R I R
Sb024730_Sorbi1    G G R V Q H V F V L - - - - C K E E G W G G A G V G A A S A S L R S L K E A V R Q A L A R V A S P E T A Y G S S S P F Q
pt034010_POPTR_    G G R V K S I L V L - - - - C S E C S E E G - - - - - - S V S I S T I K Q S L N L V L S R I A - S S S V P S N - Y R I R
gm031874_Glyma1    G G R I K S I L V L - - - - C S K D S E - - - - - - - - S V C L A T L K Q S L K S A I T K I A S S S S M A S S - C P S R
 
AT2G40200.1     S K R Q R W F L S S H Y S H N E -
Sb024730_Sorbi1    S K R Q R - I L E S H Y S I M S I
pt034010_POPTR_    S K R Q R F F L P S H L S E Q Y E
gm031874_Glyma1    S K R Q R F F L P S H C L Q - - -
 
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