fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034010 not found in 259aa AT2G40200.1 1st_1st 0.374100719 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40200.1     MENSYD--------SSKWSDSTTP-YMVSWSLQSESSDSDWNRFNL-GFSSSSFGGNFPA
pt034010_POPTR_ MEDHYSPCWPAAPAEANWDQTSAAVYDESFLVPCPSHASASANFQVYGFPSWSVPLQEAS
                **: *.        .::*.::::. *  *: : . *  *   .*:: **.* *.  : .:

AT2G40200.1     DDCVGGIEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVKE
pt034010_POPTR_ ED------KAASSSKSHSQAEKRRRDRINAQLGILRKLVPKSEKMDKAALLGSAIDHVKD
                :*      ** * *:**  **********::*  ******:*:*:******.:.*::**:

AT2G40200.1     LKQKAAESPIFQDLPTEADEVTVQ---------PETISDFESNTNTIIFKASFCCEDQPE
pt034010_POPTR_ LKQKATEISRTFTIPTEVDEVTVDCDVSQVTSPPSTNKD---KDNTFI-RASVCCDDRPE
                *****:* .    :***.*****:         *.* .*   : **:* :**.**:*:**

AT2G40200.1     AISEIIRVLTKLQLETIQAEIISVGGRMRINFILKDSNCNETTNIAASAKALKQSLCSAL
pt034010_POPTR_ LFSELITVLKGLRLTIVRADIASVGGRVKSILVLC-SECSEEGSVSIS--TIKQSLNLVL
                 :**:* **. *:*  ::*:* *****::  ::*  *:*.*  .:: *  ::****  .*

AT2G40200.1     NRITSSSTTTSSVCRIRSKRQRWFLSSHYSHNE-
pt034010_POPTR_ SRIASSSVPSNY--RIRSKRQRFFLPSHLSEQYE
                .**:***..:.   ********:**.** *.:
BoxShade v3.31 C (beta, 970507) Output
AT2G40200.1     M E N S Y D - - - - - - - - S S K W S D S T T P - Y M V S W S L Q S E S S D S D W N R F N L - G F S S S S F G G N F P A
pt034010_POPTR_    M E D H Y S P C W P A A P A E A N W D Q T S A A V Y D E S F L V P C P S H A S A S A N F Q V Y G F P S W S V P L Q E A S
 
AT2G40200.1     D D C V G G I E K A E S L S R S H R L A E K R R R D R I N S H L T A L R K L V P N S D K L D K A A L L A T V I E Q V K E
pt034010_POPTR_    E D - - - - - - K A A S S S K S H S Q A E K R R R D R I N A Q L G I L R K L V P K S E K M D K A A L L G S A I D H V K D
 
AT2G40200.1     L K Q K A A E S P I F Q D L P T E A D E V T V Q - - - - - - - - - P E T I S D F E S N T N T I I F K A S F C C E D Q P E
pt034010_POPTR_    L K Q K A T E I S R T F T I P T E V D E V T V D C D V S Q V T S P P S T N K D - - - K D N T F I - R A S V C C D D R P E
 
AT2G40200.1     A I S E I I R V L T K L Q L E T I Q A E I I S V G G R M R I N F I L K D S N C N E T T N I A A S A K A L K Q S L C S A L
pt034010_POPTR_    L F S E L I T V L K G L R L T I V R A D I A S V G G R V K S I L V L C - S E C S E E G S V S I S - - T I K Q S L N L V L
 
AT2G40200.1     N R I T S S S T T T S S V C R I R S K R Q R W F L S S H Y S H N E -
pt034010_POPTR_    S R I A S S S V P S N Y - - R I R S K R Q R F F L P S H L S E Q Y E
 
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