fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Sb024730 not found in 265aa AT2G40200.1 1st_1st 0.282973621 Ib
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Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40200.1     -----------MENSYDSSKWSDSTTPYMVSWSLQSESSDSDWNRFNLGFSSSSFGGNFP
Sb024730_Sorbi1 MAACQPLQGKELQPVLLPRQASSAPRAVRVAPPEMSSSSGS-------GRSTT-------
                           ::    . : *.:. .  *: .  *.**.*       * *::       

AT2G40200.1     ADDCVGGIEKAESLSRSHRLAEKRRRDRINSHLTALRKLVPNSDKLDKAALLATVIEQVK
Sb024730_Sorbi1 ---------EARAL-KIHSEAERRRRERINAHLATLRRMIPDTRQMDKATLLARVVEQVK
                         :*.:* : *  **:***:***:**::**:::*:: ::***:*** *:****

AT2G40200.1     ELKQKAAES-----PIFQDLPTEADEVTVQPETISDFESNTNTIIF-KASFCCEDQPEAI
Sb024730_Sorbi1 LLKRNASEATTQSVP----LPPETDEVSIELHT----GAGADKVIYIKASISCDDRPDLV
                 **::*:*:     *    **.*:***::: .*     :.::.:*: ***:.*:*:*: :

AT2G40200.1     SEIIRVLTKLQLETIQAEIISVGGRMRINFILKDSNCNE-------TTNIAASAKALKQS
Sb024730_Sorbi1 AGLAQAFHGLRLRTVRADMTSLGGRVQHVFVL----CKEEGWGGAGVGAASASLRSLKEA
                : : :.:  *:*.*::*:: *:***::  *:*    *:*       .   :** ::**::

AT2G40200.1     LCSALNRITSSSTTTSSVCRIRSKRQRWFLSSHYSHNE-
Sb024730_Sorbi1 VRQALARVASPETAYGSSSPFQSKRQR-ILESHYSIMSI
                : .** *::*..*: .* . ::***** :*.****  .
BoxShade v3.31 C (beta, 970507) Output
AT2G40200.1     - - - - - - - - - - - M E N S Y D S S K W S D S T T P Y M V S W S L Q S E S S D S D W N R F N L G F S S S S F G G N F P
Sb024730_Sorbi1    M A A C Q P L Q G K E L Q P V L L P R Q A S S A P R A V R V A P P E M S S S S G S - - - - - - - G R S T T - - - - - - -
 
AT2G40200.1     A D D C V G G I E K A E S L S R S H R L A E K R R R D R I N S H L T A L R K L V P N S D K L D K A A L L A T V I E Q V K
Sb024730_Sorbi1    - - - - - - - - - E A R A L - K I H S E A E R R R R E R I N A H L A T L R R M I P D T R Q M D K A T L L A R V V E Q V K
 
AT2G40200.1     E L K Q K A A E S - - - - - P I F Q D L P T E A D E V T V Q P E T I S D F E S N T N T I I F - K A S F C C E D Q P E A I
Sb024730_Sorbi1    L L K R N A S E A T T Q S V P - - - - L P P E T D E V S I E L H T - - - - G A G A D K V I Y I K A S I S C D D R P D L V
 
AT2G40200.1     S E I I R V L T K L Q L E T I Q A E I I S V G G R M R I N F I L K D S N C N E - - - - - - - T T N I A A S A K A L K Q S
Sb024730_Sorbi1    A G L A Q A F H G L R L R T V R A D M T S L G G R V Q H V F V L - - - - C K E E G W G G A G V G A A S A S L R S L K E A
 
AT2G40200.1     L C S A L N R I T S S S T T T S S V C R I R S K R Q R W F L S S H Y S H N E -
Sb024730_Sorbi1    V R Q A L A R V A S P E T A Y G S S S P F Q S K R Q R - I L E S H Y S I M S I
 
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