fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40200.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Gm031874 not found in 279aa AT2G40200.1 1st_1st 0.383693045 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40200.1     --------------------MENSYDSSKWSDSTTPYMVSWSLQSESSDSDWNRFNLGFS
gm031874_Glyma1 MGDKRLRNHGRNFRMVSIVTMENYYDSG-WHMGTS----NWAQCSDHS-----------S
                                    *** ***. *  .*:    .*:  *: *           *

AT2G40200.1     SSSFG-------------------GNF-----PADDCVGGIEKAESLSRSHRLAEKRRRD
gm031874_Glyma1 SSSFAVPTQQILPHHVTDAASLQFGEFHSWSLPIEGAAE--ERAISASKSHRQAEKRRRD
                ****.                   *:*     * :...   *:* * *:*** *******

AT2G40200.1     RINSHLTALRKLVPNSDKLDKAALLATVIEQVKELKQKAAESPIFQDLPTEADEVTVQPE
gm031874_Glyma1 RINAQLATLRKLIPKSDKMDKAALLGSVIDQVKDLKRKAMDVSRAFTVPTEIDEVSIHHD
                ***::*::****:*:***:******.:**:***:**:** : .    :*** ***::: :

AT2G40200.1     TISDFESNT-------NTIIFKASFCCEDQPEAISEIIRVLTKLQLETIQAEIISVGGRM
gm031874_Glyma1 HVLQDESCTEKVNKLKDNIVIKASVCCDDRPELFPELIQVLKGLRLTAVKADIASVGGRI
                 : : ** *       :.*::***.**:*:** :.*:*:**. *:* :::*:* *****:

AT2G40200.1     RINFIL--KDSNCNETTNIAASAKALKQSLCSALNRITSSSTTTSSVCRIRSKRQRWFLS
gm031874_Glyma1 KSILVLCSKDS---ESVCLA----TLKQSLKSAITKIASSSSMASS-CPSRSKRQRFFLP
                :  ::*  ***   *:. :*    :***** **:.:*:***: :** *  ******:**.

AT2G40200.1     SHYSHNE
gm031874_Glyma1 SHCLQ--
                **  :
BoxShade v3.31 C (beta, 970507) Output
AT2G40200.1     - - - - - - - - - - - - - - - - - - - - M E N S Y D S S K W S D S T T P Y M V S W S L Q S E S S D S D W N R F N L G F S
gm031874_Glyma1    M G D K R L R N H G R N F R M V S I V T M E N Y Y D S G - W H M G T S - - - - N W A Q C S D H S - - - - - - - - - - - S
 
AT2G40200.1     S S S F G - - - - - - - - - - - - - - - - - - - G N F - - - - - P A D D C V G G I E K A E S L S R S H R L A E K R R R D
gm031874_Glyma1    S S S F A V P T Q Q I L P H H V T D A A S L Q F G E F H S W S L P I E G A A E - - E R A I S A S K S H R Q A E K R R R D
 
AT2G40200.1     R I N S H L T A L R K L V P N S D K L D K A A L L A T V I E Q V K E L K Q K A A E S P I F Q D L P T E A D E V T V Q P E
gm031874_Glyma1    R I N A Q L A T L R K L I P K S D K M D K A A L L G S V I D Q V K D L K R K A M D V S R A F T V P T E I D E V S I H H D
 
AT2G40200.1     T I S D F E S N T - - - - - - - N T I I F K A S F C C E D Q P E A I S E I I R V L T K L Q L E T I Q A E I I S V G G R M
gm031874_Glyma1    H V L Q D E S C T E K V N K L K D N I V I K A S V C C D D R P E L F P E L I Q V L K G L R L T A V K A D I A S V G G R I
 
AT2G40200.1     R I N F I L - - K D S N C N E T T N I A A S A K A L K Q S L C S A L N R I T S S S T T T S S V C R I R S K R Q R W F L S
gm031874_Glyma1    K S I L V L C S K D S - - - E S V C L A - - - - T L K Q S L K S A I T K I A S S S S M A S S - C P S R S K R Q R F F L P
 
AT2G40200.1     S H Y S H N E
gm031874_Glyma1    S H C L Q - -
 
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