Input
| Putative repression domain
|
|
AT2G40220.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Pt034942 |
not found in 412aa |
AT2G40220.1 |
1st_1st |
0.308988764 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (1 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G40220.1 -------------------------------MDPLASQHQHN------------------
pt034942_POPTR_ MRTSAACLLQYEAATFSLSEYKNINTCSHCRSPPSSAIYTHDIQTSAQAKATLYFDRSIT
* :: : *:
AT2G40220.1 ---------------HLEDNNQTLTHNNPQ------------------------------
pt034942_POPTR_ KERGPLSLNKALKAIHFIMDNSSLSH-PPQEPTTTTTKLSSNEKSTDNNTTATTPTTATT
*: :*.:*:* **
AT2G40220.1 SDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFAT
pt034942_POPTR_ SDTNSNNNSSGNSRKCKGKGGPDNGKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFAT
**:.::..:*. .** ********.***********************************
AT2G40220.1 AEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSSVSAASSPSTSSSSTQTLRPLLP
pt034942_POPTR_ AEDAARAYDRAAFILYGSRAHLNLQPS-----GSSSSAQSGSTSRNSTSSSSQTLRPLLP
************. ******:*** ** .****: *.::* .::***:********
AT2G40220.1 RPAAATVGGG------------------ANFGPYGIP-FNNNIFLNGGTSMLCPSYGFFP
pt034942_POPTR_ RPPGFGCGFGFTFSLSNPMASPSVTAASSGFTPYGVNCYSNNVV---GSALQCSSTNEMP
**.. * * :.* ***: :.**:. *::: *.* . :*
AT2G40220.1 QQQQQQNQMVQMGQFQHQQYQNLHSNTNNNKI---SDIELTDVPVTNSTSFHHEVALGQE
pt034942_POPTR_ GQNHQQ-VMLQGYLIQHGA-----NTTNPNNIFVSSSVD----PSTTTSYQNHCHRLPQH
*::** *:* :** ..** *:* *.:: * *.:: :* * *.
AT2G40220.1 QGGSGCNNNSSMEDLNSLAGSVGSSLSI--THPPPLVDPVCSMGLDPGYMVGDGSSTIWP
pt034942_POPTR_ H---------AYDDVNALGGSVGSSFSLSGSNTPPVVAPAGHLLQDPVMHIGPGSPSAW-
: : :*:*:*.******:*: ::.**:* *. : ** :* **.: *
AT2G40220.1 FGGEEEYSHNWGSIWDFIDPILGEFY
pt034942_POPTR_ --NDEEYPPP--SIWDDEDPFLFDF-
.:***. **** **:* :*
BoxShade v3.31 C (beta, 970507) Output
AT2G40220.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
M |
D |
P |
L |
A |
S |
Q |
H |
Q |
H |
N |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt034942_POPTR_ |
M |
R |
T |
S |
A |
A |
C |
L |
L |
Q |
Y |
E |
A |
A |
T |
F |
S |
L |
S |
E |
Y |
K |
N |
I |
N |
T |
C |
S |
H |
C |
R |
S |
P |
P |
S |
S |
A |
I |
Y |
T |
H |
D |
I |
Q |
T |
S |
A |
Q |
A |
K |
A |
T |
L |
Y |
F |
D |
R |
S |
I |
T |
|
AT2G40220.1 |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
H |
L |
E |
D |
N |
N |
Q |
T |
L |
T |
H |
N |
N |
P |
Q |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
pt034942_POPTR_ |
K |
E |
R |
G |
P |
L |
S |
L |
N |
K |
A |
L |
K |
A |
I |
H |
F |
I |
M |
D |
N |
S |
S |
L |
S |
H |
- |
P |
P |
Q |
E |
P |
T |
T |
T |
T |
T |
K |
L |
S |
S |
N |
E |
K |
S |
T |
D |
N |
N |
T |
T |
A |
T |
T |
P |
T |
T |
A |
T |
T |
|
AT2G40220.1 |
S |
D |
S |
T |
T |
D |
S |
S |
T |
S |
S |
A |
Q |
R |
K |
R |
K |
G |
K |
G |
G |
P |
D |
N |
S |
K |
F |
R |
Y |
R |
G |
V |
R |
Q |
R |
S |
W |
G |
K |
W |
V |
A |
E |
I |
R |
E |
P |
R |
K |
R |
T |
R |
K |
W |
L |
G |
T |
F |
A |
T |
pt034942_POPTR_ |
S |
D |
T |
N |
S |
N |
N |
N |
S |
S |
G |
N |
S |
R |
K |
C |
K |
G |
K |
G |
G |
P |
D |
N |
G |
K |
F |
R |
Y |
R |
G |
V |
R |
Q |
R |
S |
W |
G |
K |
W |
V |
A |
E |
I |
R |
E |
P |
R |
K |
R |
T |
R |
K |
W |
L |
G |
T |
F |
A |
T |
|
AT2G40220.1 |
A |
E |
D |
A |
A |
R |
A |
Y |
D |
R |
A |
A |
V |
Y |
L |
Y |
G |
S |
R |
A |
Q |
L |
N |
L |
T |
P |
S |
S |
P |
S |
S |
V |
S |
S |
S |
S |
S |
S |
V |
S |
A |
A |
S |
S |
P |
S |
T |
S |
S |
S |
S |
T |
Q |
T |
L |
R |
P |
L |
L |
P |
pt034942_POPTR_ |
A |
E |
D |
A |
A |
R |
A |
Y |
D |
R |
A |
A |
F |
I |
L |
Y |
G |
S |
R |
A |
H |
L |
N |
L |
Q |
P |
S |
- |
- |
- |
- |
- |
G |
S |
S |
S |
S |
A |
Q |
S |
G |
S |
T |
S |
R |
N |
S |
T |
S |
S |
S |
S |
Q |
T |
L |
R |
P |
L |
L |
P |
|
AT2G40220.1 |
R |
P |
A |
A |
A |
T |
V |
G |
G |
G |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
A |
N |
F |
G |
P |
Y |
G |
I |
P |
- |
F |
N |
N |
N |
I |
F |
L |
N |
G |
G |
T |
S |
M |
L |
C |
P |
S |
Y |
G |
F |
F |
P |
pt034942_POPTR_ |
R |
P |
P |
G |
F |
G |
C |
G |
F |
G |
F |
T |
F |
S |
L |
S |
N |
P |
M |
A |
S |
P |
S |
V |
T |
A |
A |
S |
S |
G |
F |
T |
P |
Y |
G |
V |
N |
C |
Y |
S |
N |
N |
V |
V |
- |
- |
- |
G |
S |
A |
L |
Q |
C |
S |
S |
T |
N |
E |
M |
P |
|
AT2G40220.1 |
Q |
Q |
Q |
Q |
Q |
Q |
N |
Q |
M |
V |
Q |
M |
G |
Q |
F |
Q |
H |
Q |
Q |
Y |
Q |
N |
L |
H |
S |
N |
T |
N |
N |
N |
K |
I |
- |
- |
- |
S |
D |
I |
E |
L |
T |
D |
V |
P |
V |
T |
N |
S |
T |
S |
F |
H |
H |
E |
V |
A |
L |
G |
Q |
E |
pt034942_POPTR_ |
G |
Q |
N |
H |
Q |
Q |
- |
V |
M |
L |
Q |
G |
Y |
L |
I |
Q |
H |
G |
A |
- |
- |
- |
- |
- |
N |
T |
T |
N |
P |
N |
N |
I |
F |
V |
S |
S |
S |
V |
D |
- |
- |
- |
- |
P |
S |
T |
T |
T |
S |
Y |
Q |
N |
H |
C |
H |
R |
L |
P |
Q |
H |
|
AT2G40220.1 |
Q |
G |
G |
S |
G |
C |
N |
N |
N |
S |
S |
M |
E |
D |
L |
N |
S |
L |
A |
G |
S |
V |
G |
S |
S |
L |
S |
I |
- |
- |
T |
H |
P |
P |
P |
L |
V |
D |
P |
V |
C |
S |
M |
G |
L |
D |
P |
G |
Y |
M |
V |
G |
D |
G |
S |
S |
T |
I |
W |
P |
pt034942_POPTR_ |
H |
- |
- |
- |
- |
- |
- |
- |
- |
- |
A |
Y |
D |
D |
V |
N |
A |
L |
G |
G |
S |
V |
G |
S |
S |
F |
S |
L |
S |
G |
S |
N |
T |
P |
P |
V |
V |
A |
P |
A |
G |
H |
L |
L |
Q |
D |
P |
V |
M |
H |
I |
G |
P |
G |
S |
P |
S |
A |
W |
- |
|
AT2G40220.1 |
F |
G |
G |
E |
E |
E |
Y |
S |
H |
N |
W |
G |
S |
I |
W |
D |
F |
I |
D |
P |
I |
L |
G |
E |
F |
Y |
pt034942_POPTR_ |
- |
- |
N |
D |
E |
E |
Y |
P |
P |
P |
- |
- |
S |
I |
W |
D |
D |
E |
D |
P |
F |
L |
F |
D |
F |
- |
|
|