fioreDB : Database for Flower Bio-engineering by CRES-T system
fioreDB : Database for Flower Bio-engineering by CRES-T system
Input Putative repression domain
AT2G40220.1 not found
Ortholog Putative repression domain Reverse top hit Relation Blast score ratio Type
Pt034942 not found in 412aa AT2G40220.1 1st_1st 0.308988764 Ib
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.

CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)


AT2G40220.1     -------------------------------MDPLASQHQHN------------------
pt034942_POPTR_ MRTSAACLLQYEAATFSLSEYKNINTCSHCRSPPSSAIYTHDIQTSAQAKATLYFDRSIT
                                                 * :: : *:                  

AT2G40220.1     ---------------HLEDNNQTLTHNNPQ------------------------------
pt034942_POPTR_ KERGPLSLNKALKAIHFIMDNSSLSH-PPQEPTTTTTKLSSNEKSTDNNTTATTPTTATT
                               *:  :*.:*:*  **                              

AT2G40220.1     SDSTTDSSTSSAQRKRKGKGGPDNSKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFAT
pt034942_POPTR_ SDTNSNNNSSGNSRKCKGKGGPDNGKFRYRGVRQRSWGKWVAEIREPRKRTRKWLGTFAT
                **:.::..:*. .** ********.***********************************

AT2G40220.1     AEDAARAYDRAAVYLYGSRAQLNLTPSSPSSVSSSSSSVSAASSPSTSSSSTQTLRPLLP
pt034942_POPTR_ AEDAARAYDRAAFILYGSRAHLNLQPS-----GSSSSAQSGSTSRNSTSSSSQTLRPLLP
                ************. ******:*** **     .****: *.::* .::***:********

AT2G40220.1     RPAAATVGGG------------------ANFGPYGIP-FNNNIFLNGGTSMLCPSYGFFP
pt034942_POPTR_ RPPGFGCGFGFTFSLSNPMASPSVTAASSGFTPYGVNCYSNNVV---GSALQCSSTNEMP
                **..   * *                  :.* ***:  :.**:.   *::: *.* . :*

AT2G40220.1     QQQQQQNQMVQMGQFQHQQYQNLHSNTNNNKI---SDIELTDVPVTNSTSFHHEVALGQE
pt034942_POPTR_ GQNHQQ-VMLQGYLIQHGA-----NTTNPNNIFVSSSVD----PSTTTSYQNHCHRLPQH
                 *::**  *:*   :**       ..** *:*   *.::    * *.::  :*   * *.

AT2G40220.1     QGGSGCNNNSSMEDLNSLAGSVGSSLSI--THPPPLVDPVCSMGLDPGYMVGDGSSTIWP
pt034942_POPTR_ H---------AYDDVNALGGSVGSSFSLSGSNTPPVVAPAGHLLQDPVMHIGPGSPSAW-
                :         : :*:*:*.******:*:  ::.**:* *.  :  **   :* **.: * 

AT2G40220.1     FGGEEEYSHNWGSIWDFIDPILGEFY
pt034942_POPTR_ --NDEEYPPP--SIWDDEDPFLFDF-
                  .:***.    ****  **:* :*
BoxShade v3.31 C (beta, 970507) Output
AT2G40220.1     - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - M D P L A S Q H Q H N - - - - - - - - - - - - - - - - - -
pt034942_POPTR_    M R T S A A C L L Q Y E A A T F S L S E Y K N I N T C S H C R S P P S S A I Y T H D I Q T S A Q A K A T L Y F D R S I T
 
AT2G40220.1     - - - - - - - - - - - - - - - H L E D N N Q T L T H N N P Q - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
pt034942_POPTR_    K E R G P L S L N K A L K A I H F I M D N S S L S H - P P Q E P T T T T T K L S S N E K S T D N N T T A T T P T T A T T
 
AT2G40220.1     S D S T T D S S T S S A Q R K R K G K G G P D N S K F R Y R G V R Q R S W G K W V A E I R E P R K R T R K W L G T F A T
pt034942_POPTR_    S D T N S N N N S S G N S R K C K G K G G P D N G K F R Y R G V R Q R S W G K W V A E I R E P R K R T R K W L G T F A T
 
AT2G40220.1     A E D A A R A Y D R A A V Y L Y G S R A Q L N L T P S S P S S V S S S S S S V S A A S S P S T S S S S T Q T L R P L L P
pt034942_POPTR_    A E D A A R A Y D R A A F I L Y G S R A H L N L Q P S - - - - - G S S S S A Q S G S T S R N S T S S S S Q T L R P L L P
 
AT2G40220.1     R P A A A T V G G G - - - - - - - - - - - - - - - - - - A N F G P Y G I P - F N N N I F L N G G T S M L C P S Y G F F P
pt034942_POPTR_    R P P G F G C G F G F T F S L S N P M A S P S V T A A S S G F T P Y G V N C Y S N N V V - - - G S A L Q C S S T N E M P
 
AT2G40220.1     Q Q Q Q Q Q N Q M V Q M G Q F Q H Q Q Y Q N L H S N T N N N K I - - - S D I E L T D V P V T N S T S F H H E V A L G Q E
pt034942_POPTR_    G Q N H Q Q - V M L Q G Y L I Q H G A - - - - - N T T N P N N I F V S S S V D - - - - P S T T T S Y Q N H C H R L P Q H
 
AT2G40220.1     Q G G S G C N N N S S M E D L N S L A G S V G S S L S I - - T H P P P L V D P V C S M G L D P G Y M V G D G S S T I W P
pt034942_POPTR_    H - - - - - - - - - A Y D D V N A L G G S V G S S F S L S G S N T P P V V A P A G H L L Q D P V M H I G P G S P S A W -
 
AT2G40220.1     F G G E E E Y S H N W G S I W D F I D P I L G E F Y
pt034942_POPTR_    - - N D E E Y P P P - - S I W D D E D P F L F D F -
 
0