Input
| Putative repression domain
|
|
AT2G40220.1 |
not found |
|
Ortholog
| Putative repression domain
| Reverse top hit
| Relation
| Blast score ratio
| Type
|
Sb018421 |
not found in 249aa |
AT2G40220.1 |
1st_1st |
0.200374531 |
Ib |
Get sequence file
Get alignment file
Get formatted file made by BOXSHADE
Sequence file prepared (0 sec required). Alignment has started.
CLUSTAL format alignment by MAFFT FFT-NS-1 (v7.475)
AT2G40220.1 MDPLASQHQHNHLEDNNQTLTHNNPQSDSTTDSSTSSA----QRKRKG---KGGPDNSKF
Sb018421_Sorbi1 MEP-------------------NNNQPAATAEEAAAGSGPGGEGGRKGKAPKGGPENGKF
*:* ** *. :*::.:::.: : *** ****:*.**
AT2G40220.1 RYRGVRQRSWGKWVAEIREPRKRTRKWLGTFATAEDAARAYDRAAVYLYGSRAQLNLTPS
Sb018421_Sorbi1 RYRGVRQRSWGKWVAEIREPRKRSRKWLGTFATAEDAARAYDRAALLLYGPRAHLNLTSP
***********************:*********************: ***.**:****..
AT2G40220.1 SPSSVSSSSSSVSAASSPSTSSSSTQTLRPLLPRPAAATVGGGANFGPYGIPFNNNIFLN
Sb018421_Sorbi1 PPPTLAAPRS--HPHSSATSSSSAPPALRPLLPRP----------------PLHHQ--LS
.*.::::. * . **.::***:. :******** *:::: *.
AT2G40220.1 GGTSMLCPSYGFFPQQQQQQNQMVQMGQFQHQQYQNLHSNTNNNKISDIELTDVPVTNST
Sb018421_Sorbi1 SGACAPAPDFHHHHQQFQCHHLLPQAQPTPPLYYAN---------------TATASTVTT
.*:. .*.: .. ** * :: : * * * * .. * :*
AT2G40220.1 SFHHEVALGQEQGGSGCNNNSSMEDLNSLAGSVGSSLSITHPPPLVDPVCSMGLDPGYMV
Sb018421_Sorbi1 TVPTRVAVPQE--------------------------------PAVAPAEPQASTPEEA-
:. .**: ** * * *. . . *
AT2G40220.1 GDGSSTIWPFGGEEEYSHNWGSIWDFIDPILGEFY------
Sb018421_Sorbi1 --PRETGWDYHGGEEEDYAAALLWDEPEPF---FWFDVFLK
.* * : * ** .: . :** :*: *:
BoxShade v3.31 C (beta, 970507) Output
AT2G40220.1 |
M |
D |
P |
L |
A |
S |
Q |
H |
Q |
H |
N |
H |
L |
E |
D |
N |
N |
Q |
T |
L |
T |
H |
N |
N |
P |
Q |
S |
D |
S |
T |
T |
D |
S |
S |
T |
S |
S |
A |
- |
- |
- |
- |
Q |
R |
K |
R |
K |
G |
- |
- |
- |
K |
G |
G |
P |
D |
N |
S |
K |
F |
Sb018421_Sorbi1 |
M |
E |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
N |
N |
N |
Q |
P |
A |
A |
T |
A |
E |
E |
A |
A |
A |
G |
S |
G |
P |
G |
G |
E |
G |
G |
R |
K |
G |
K |
A |
P |
K |
G |
G |
P |
E |
N |
G |
K |
F |
|
AT2G40220.1 |
R |
Y |
R |
G |
V |
R |
Q |
R |
S |
W |
G |
K |
W |
V |
A |
E |
I |
R |
E |
P |
R |
K |
R |
T |
R |
K |
W |
L |
G |
T |
F |
A |
T |
A |
E |
D |
A |
A |
R |
A |
Y |
D |
R |
A |
A |
V |
Y |
L |
Y |
G |
S |
R |
A |
Q |
L |
N |
L |
T |
P |
S |
Sb018421_Sorbi1 |
R |
Y |
R |
G |
V |
R |
Q |
R |
S |
W |
G |
K |
W |
V |
A |
E |
I |
R |
E |
P |
R |
K |
R |
S |
R |
K |
W |
L |
G |
T |
F |
A |
T |
A |
E |
D |
A |
A |
R |
A |
Y |
D |
R |
A |
A |
L |
L |
L |
Y |
G |
P |
R |
A |
H |
L |
N |
L |
T |
S |
P |
|
AT2G40220.1 |
S |
P |
S |
S |
V |
S |
S |
S |
S |
S |
S |
V |
S |
A |
A |
S |
S |
P |
S |
T |
S |
S |
S |
S |
T |
Q |
T |
L |
R |
P |
L |
L |
P |
R |
P |
A |
A |
A |
T |
V |
G |
G |
G |
A |
N |
F |
G |
P |
Y |
G |
I |
P |
F |
N |
N |
N |
I |
F |
L |
N |
Sb018421_Sorbi1 |
P |
P |
P |
T |
L |
A |
A |
P |
R |
S |
- |
- |
H |
P |
H |
S |
S |
A |
T |
S |
S |
S |
S |
A |
P |
P |
A |
L |
R |
P |
L |
L |
P |
R |
P |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
L |
H |
H |
Q |
- |
- |
L |
S |
|
AT2G40220.1 |
G |
G |
T |
S |
M |
L |
C |
P |
S |
Y |
G |
F |
F |
P |
Q |
Q |
Q |
Q |
Q |
Q |
N |
Q |
M |
V |
Q |
M |
G |
Q |
F |
Q |
H |
Q |
Q |
Y |
Q |
N |
L |
H |
S |
N |
T |
N |
N |
N |
K |
I |
S |
D |
I |
E |
L |
T |
D |
V |
P |
V |
T |
N |
S |
T |
Sb018421_Sorbi1 |
S |
G |
A |
C |
A |
P |
A |
P |
D |
F |
H |
H |
H |
H |
Q |
Q |
F |
Q |
C |
H |
H |
L |
L |
P |
Q |
A |
Q |
P |
T |
P |
P |
L |
Y |
Y |
A |
N |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
T |
A |
T |
A |
S |
T |
V |
T |
T |
|
AT2G40220.1 |
S |
F |
H |
H |
E |
V |
A |
L |
G |
Q |
E |
Q |
G |
G |
S |
G |
C |
N |
N |
N |
S |
S |
M |
E |
D |
L |
N |
S |
L |
A |
G |
S |
V |
G |
S |
S |
L |
S |
I |
T |
H |
P |
P |
P |
L |
V |
D |
P |
V |
C |
S |
M |
G |
L |
D |
P |
G |
Y |
M |
V |
Sb018421_Sorbi1 |
T |
V |
P |
T |
R |
V |
A |
V |
P |
Q |
E |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
- |
P |
A |
V |
A |
P |
A |
E |
P |
Q |
A |
S |
T |
P |
E |
E |
A |
- |
|
AT2G40220.1 |
G |
D |
G |
S |
S |
T |
I |
W |
P |
F |
G |
G |
E |
E |
E |
Y |
S |
H |
N |
W |
G |
S |
I |
W |
D |
F |
I |
D |
P |
I |
L |
G |
E |
F |
Y |
- |
- |
- |
- |
- |
- |
Sb018421_Sorbi1 |
- |
- |
P |
R |
E |
T |
G |
W |
D |
Y |
H |
G |
G |
E |
E |
E |
D |
Y |
A |
A |
A |
L |
L |
W |
D |
E |
P |
E |
P |
F |
- |
- |
- |
F |
W |
F |
D |
V |
F |
L |
K |
|
|